RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 LRRC3CA6NJW4 275 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 ENPP3O14638 875 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 C1QL1O75973 258 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 PCSK1P29120 753 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 MCAMP43121 646 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 SRSF2Q01130 221 aaKnown RBP3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 NHLH1Q02575 133 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 ANO4Q32M45 955 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 EPHA10Q5JZY3 1008 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 PAPD7Q5XG87 772 aaKnown RBP3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 SEM1Q6ZVN7 128 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 KCNK18Q7Z418 384 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 NPM2Q86SE8 214 aaKnown RBP3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 UBR7Q8N806 425 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 SSH3Q8TE77 659 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 LMBR1Q8WVP7 490 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 MARS2Q96GW9 593 aaKnown RBP3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 ORAI2Q96SN7 254 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 ASB6Q9NWX5 421 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 FAM30AQ9NZY2 134 aa3.33□□□□□ -1.88
RNU4-42P-201ENST00000364738 TRGV11A0A075B6L2 103 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 CDHR4A6H8M9 788 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 PEX1O43933 1283 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 ERBB2P04626 1255 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 CKBP12277 381 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 GSPT1P15170 499 aaKnown RBP3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 SOX5P35711 763 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 SLC5A3P53794 718 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 NOMO3P69849 1222 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 MGAT2Q10469 447 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 SEPT2Q15019 361 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 NOMO2Q5JPE7 1267 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 AKNAD1Q5T1N1 836 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 STRA8Q7Z7C7 330 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 SRRM1Q8IYB3 904 aaKnown RBP3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 LNX2Q8N448 690 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 FITM2Q8N6M3 262 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 CCHCR1Q8TD31 782 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 PNKPQ96T60 521 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 VTA1Q9NP79 307 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 IL17RBQ9NRM6 502 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 CCM2LQ9NUG4 571 aaPredicted RBP3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 DNAJC28Q9NX36 388 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 HSFX1Q9UBD0 423 aa3.32□□□□□ -1.88
RNU4-42P-201ENST00000364738 COL11A2P13942 1736 aaPredicted RBP3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 FAM171A2A8MVW0 826 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 KIAA0391O15091 583 aaKnown RBP3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 ORC4O43929 436 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 BRINP1O60477 761 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 ZFPL1O95159 310 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 OSMP13725 252 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 SLC6A9P48067 706 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 GYS2P54840 703 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 TMPRSS15P98073 1019 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 CREMQ03060 361 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 SLFN5Q08AF3 891 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 FOXF2Q12947 444 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 MTM1Q13496 603 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 SF3B3Q15393 1217 aaKnown RBP3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 TBC1D15Q8TC07 691 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 NUP133Q8WUM0 1156 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 TMEM125Q96AQ2 219 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 CYFIP2Q96F07 1278 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 MED15Q96RN5 788 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 GSTO2Q9H4Y5 243 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 CAAP1Q9H8G2 361 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 C14orf119Q9NWQ9 140 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 RNF7Q9UBF6 113 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 DNM3Q9UQ16 869 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 PCDHGA2Q9Y5H1 932 aa3.31□□□□□ -1.88
RNU4-42P-201ENST00000364738 TCRBV7S2A1N4TA0A589 114 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 DNAJC9-AS1A6NH13 148 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 YY2O15391 372 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 PROP1O75360 226 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 HAUS5O94927 633 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 AMY1AP04745 511 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 FCER1AP12319 257 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 ABCG1P45844 678 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 PROK1P58294 105 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 STAT4Q14765 748 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 ATP2B3Q16720 1220 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 CT47A1Q5JQC4 288 aaPredicted RBP3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 GRASPQ7Z6J2 395 aaPredicted RBP3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 ZGPATQ8N5A5 531 aaKnown RBP3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 CHAC2Q8WUX2 184 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 SMG7Q92540 1137 aaKnown RBP3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 AHCYL2Q96HN2 611 aaKnown RBP3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 UROC1Q96N76 676 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 SLC29A3Q9BZD2 475 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 MANSC1Q9H8J5 431 aa3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 ARPP21Q9UBL0 812 aaPredicted RBP3.3□□□□□ -1.88
RNU4-42P-201ENST00000364738 MYBBP1AQ9BQG0 1328 aaKnown RBP3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 A0A1W2PS29 197 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 DDCP20711 480 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 GPD1P21695 349 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 FOLR3P41439 243 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 GPR3P46089 330 aa3.29□□□□□ -1.88
RNU4-42P-201ENST00000364738 MTNR1BP49286 362 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms