RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 THG1LQ9NWX6 298 aaKnown RBP3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 RAB11FIP3O75154 756 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 ECHS1P30084 290 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 GUCY1A2P33402 732 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 POLGP54098 1239 aaPredicted RBP3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 RAP2BP61225 183 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 EXOSC10Q01780 885 aaKnown RBP3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 TFF2Q03403 129 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 NAALADL2Q58DX5 795 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 RUSC1-AS1Q66K80 236 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 C11orf74Q86VG3 221 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 KRT73Q86Y46 540 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 FITM2Q8N6M3 262 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 CYFIP2Q96F07 1278 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 HMCESQ96FZ2 354 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 FBXL20Q96IG2 436 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 KCTD10Q9H3F6 313 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 WWOXQ9NZC7 414 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 SIK3Q9Y2K2 1263 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 AATKQ6ZMQ8 1374 aa3.25□□□□□ -1.89
RNU6-238P-201ENST00000363313 CCDC78A2IDD5 438 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 GSG1L2A8MUP6 293 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 PRR23D1E9PI22 279 aaPredicted RBP3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 PPEF2O14830 753 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 ADCY6O43306 1168 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 AKR1B10O60218 316 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 KDM1AO60341 852 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 CD1AP06126 327 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 PRR23D2P0DMB1 279 aaPredicted RBP3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 GTF2F1P35269 517 aaKnown RBP eCLIP3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 SREBF1P36956 1147 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 LGALS4P56470 323 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 NXPH1P58417 271 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 SART3Q15020 963 aaKnown RBP3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 GEN1Q17RS7 908 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 AWAT2Q6E213 333 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 ZDHHC17Q8IUH5 632 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 SAMD14Q8IZD0 417 aaPredicted RBP3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 AHI1Q8N157 1196 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 NXPE1Q8N323 547 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 REPS2Q8NFH8 660 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 RIN2Q8WYP3 895 aaPredicted RBP3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 FATE1Q969F0 183 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 MARS2Q96GW9 593 aaKnown RBP3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 HAPLN3Q96S86 360 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 ANLNQ9NQW6 1124 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 LANCL2Q9NS86 450 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 USP25Q9UHP3 1055 aa3.24□□□□□ -1.89
RNU6-238P-201ENST00000363313 PRAMEF33A0A0G2JMD5 474 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 WDR27A2RRH5 827 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 PRAMEF10O60809 474 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 SNHG28P0DPA3 235 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 CCKARP32238 428 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 RPS7P62081 194 aaKnown RBP3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 PABPC4Q13310 644 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 KLF9Q13886 244 aaPredicted RBP3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 TWIST1Q15672 202 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 ETFDHQ16134 617 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 ANO4Q32M45 955 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 Q6ZVL8 140 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 TECPR1Q7Z6L1 1165 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 CLNKQ7Z7G1 428 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 NLGN4YQ8NFZ3 816 aaPredicted RBP3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 KAT6AQ92794 2004 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 ACAP3Q96P50 834 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 GREM2Q9H772 168 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 TMEM140Q9NV12 185 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 ADAM21Q9UKJ8 722 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 PADI4Q9UM07 663 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 PCDHB1Q9Y5F3 818 aa3.23□□□□□ -1.89
RNU6-238P-201ENST00000363313 ZNF891A8MT65 544 aaPredicted RBP3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 PRSS23O95084 383 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 ELFN1P0C7U0 828 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 RAP2AP10114 183 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 NR4A2P43354 598 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 NEK4P51957 841 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 MRPS9P82933 396 aaKnown RBP3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 SQSTM1Q13501 440 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 FSCN1Q16658 493 aaKnown RBP3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 UGT8Q16880 541 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 MIDNQ504T8 468 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 ZNF529Q6P280 563 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 PQLC1Q8N2U9 271 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 PPM1KQ8N3J5 372 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 TFAP2BQ92481 460 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 UHRF1Q96T88 793 aaPredicted RBP3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 RBM12Q9NTZ6 932 aaKnown RBP3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 SPTLC3Q9NUV7 552 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 HSFX1Q9UBD0 423 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 SCOCQ9UIL1 159 aa3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 NOC2LQ9Y3T9 749 aaKnown RBP3.22□□□□□ -1.89
RNU6-238P-201ENST00000363313 TARM1B6A8C7 271 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 ADM5C9JUS6 153 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 E7ENX8 843 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 PPP6CO00743 305 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 ENDOD1O94919 500 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 TUBB4AP04350 444 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 KCNA2P16389 499 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 SLC6A2P23975 617 aa3.21□□□□□ -1.9
RNU6-238P-201ENST00000363313 EPHB2P29323 1055 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms