RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ADM5C9JUS6 153 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 MED24O75448 989 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 RSPH10BP0C881 870 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 SLC1A1P43005 524 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 KRT17Q04695 432 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 DAGLBQ8NCG7 672 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 PITPNM3Q9BZ71 974 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 TUBE1Q9UJT0 475 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 KITP10721 976 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 HADHAP40939 763 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 GPAT2Q6NUI2 795 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 NIF3L1Q9GZT8 377 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 SUN2Q9UH99 717 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 CCDC78A2IDD5 438 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 WNT10BO00744 389 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 MX2P20592 715 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 ALDH7A1P49419 539 aaKnown RBP19.6■□□□□ 0.73
CLIP2-202ENST00000361545 EPM2AIP1Q7L775 607 aaPredicted RBP19.6■□□□□ 0.73
CLIP2-202ENST00000361545 SLC7A14Q8TBB6 771 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 GMCL1Q96IK5 515 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 SLC13A1Q9BZW2 595 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 Q9H521 79 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 VTNP04004 478 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 YY1P25490 414 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 GTF2H1P32780 548 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 ST8SIA6P61647 398 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 DEUP1Q05D60 604 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 GRID2IPA4D2P6 1211 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 MAP2K2P36507 400 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 IL31Q6EBC2 164 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 WDR75Q8IWA0 830 aaKnown RBP19.59■□□□□ 0.73
CLIP2-202ENST00000361545 ESRRAP11474 423 aaPredicted RBP19.59■□□□□ 0.73
CLIP2-202ENST00000361545 KLK7P49862 253 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 GOLGA7BQ2TAP0 167 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 DCAF6Q58WW2 860 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 ABI2Q9NYB9 513 aaPredicted RBP19.59■□□□□ 0.73
CLIP2-202ENST00000361545 FZD1Q9UP38 647 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 PDHXO00330 501 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 ATMINO43313 823 aaPredicted RBP19.59■□□□□ 0.73
CLIP2-202ENST00000361545 MMEP08473 750 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 FXR1P51114 621 aaKnown RBP eCLIP19.59■□□□□ 0.73
CLIP2-202ENST00000361545 GMCL1P1Q8NEA9 526 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 IRX2Q9BZI1 471 aaPredicted RBP19.59■□□□□ 0.73
CLIP2-202ENST00000361545 NAGPAQ9UK23 515 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 SLC13A4Q9UKG4 626 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 BCL9O00512 1426 aa19.59■□□□□ 0.73
CLIP2-202ENST00000361545 KPNA7A9QM74 516 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 TAF6P49848 677 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 DDR1Q08345 913 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 SNX17Q15036 470 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 PGBD3Q8N328 593 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 ZBTB18Q99592 522 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 A0A087WUV0 522 aaPredicted RBP19.58■□□□□ 0.73
CLIP2-202ENST00000361545 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.58■□□□□ 0.73
CLIP2-202ENST00000361545 THEMIS2Q5TEJ8 643 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 GJB7Q6PEY0 223 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 PBXIP1Q96AQ6 731 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 L3MBTL3Q96JM7 780 aaPredicted RBP19.58■□□□□ 0.73
CLIP2-202ENST00000361545 ELAC2Q9BQ52 826 aaKnown RBP19.58■□□□□ 0.73
CLIP2-202ENST00000361545 MUC3BQ9H195 1237 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 PCDHB2Q9Y5E7 798 aa19.58■□□□□ 0.73
CLIP2-202ENST00000361545 COL5A2P05997 1499 aaPredicted RBP19.58■□□□□ 0.73
CLIP2-202ENST00000361545 SUPT20HL2P0C7V6 817 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 BRD2P25440 801 aaKnown RBP19.58■□□□□ 0.72
CLIP2-202ENST00000361545 IMPG1Q17R60 797 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 PAN2Q504Q3 1202 aaKnown RBP19.58■□□□□ 0.72
CLIP2-202ENST00000361545 LRRC43Q8N309 656 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 GBP7Q8N8V2 638 aaPredicted RBP19.58■□□□□ 0.72
CLIP2-202ENST00000361545 EPC1Q9H2F5 836 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 UVRAGQ9P2Y5 699 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.58■□□□□ 0.72
CLIP2-202ENST00000361545 PPP2R3BQ9Y5P8 575 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 GRB10Q13322 594 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 AGPAT3Q9NRZ7 376 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 PPARGC1AQ9UBK2 798 aaKnown RBP19.58■□□□□ 0.72
CLIP2-202ENST00000361545 SH3BP1Q9Y3L3 701 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 CTIFO43310 598 aaKnown RBP19.58■□□□□ 0.72
CLIP2-202ENST00000361545 ASMTLO95671 621 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 ANKMY2Q8IV38 441 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 STKLD1Q8NE28 680 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 SPATC1LQ9H0A9 340 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 PXMP2Q9NR77 195 aa19.58■□□□□ 0.72
CLIP2-202ENST00000361545 DCDC2CA8MYV0 355 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 B3GAT3O94766 335 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 CYP2C19P33261 490 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 SREBF1P36956 1147 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 RCOR2Q8IZ40 523 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 ATPAF2Q8N5M1 289 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 SPATA31D1Q6ZQQ2 1576 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 EEF2KO00418 725 aaKnown RBP19.57■□□□□ 0.72
CLIP2-202ENST00000361545 ALDH1A3P47895 512 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 HERVK_113P62684 666 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 NCAPHQ15003 741 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 FAM83AQ86UY5 434 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 ATP11CQ8NB49 1132 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 KLRC1P26715 233 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 DPP3Q9NY33 737 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 CHORDC1Q9UHD1 332 aaPredicted RBP19.57■□□□□ 0.72
CLIP2-202ENST00000361545 FAM187AA6NFU0 413 aa19.57■□□□□ 0.72
CLIP2-202ENST00000361545 TYK2P29597 1187 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 235 ms