RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CASP5P51878 434 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 ACAD10Q6JQN1 1059 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 FGFR1OP2Q9NVK5 253 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 DDX3XO00571 662 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■□□□ 12.6
SCAF1-201ENST00000360565 FAM153BP0C7A2 387 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 TXNP10599 105 aaKnown RBP17.28■□□□□ 0.36
SCAF1-201ENST00000360565 CYP11B1P15538 503 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 FAM153CQ494X1 144 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 MMEL1Q495T6 779 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 RASIP1Q5U651 963 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 MMTAG2Q9BU76 263 aaKnown RBP17.28■□□□□ 0.36
SCAF1-201ENST00000360565 KLHL8Q9P2G9 620 aaPredicted RBP17.28■□□□□ 0.36
SCAF1-201ENST00000360565 FAM153AQ9UHL3 310 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 ARL2BPQ9Y2Y0 163 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 PJA2O43164 708 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 CDR2LQ86X02 465 aaPredicted RBP17.27■□□□□ 0.36
SCAF1-201ENST00000360565 ATP8B4Q8TF62 1192 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 DNAJC19Q96DA6 116 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 EXTL3O43909 919 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 LPXNO60711 386 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 ATP5HO75947 161 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 HAUS5O94927 633 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 DDR1Q08345 913 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 SGSM1Q2NKQ1 1148 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 SPOPLQ6IQ16 392 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 OTOP1Q7RTM1 612 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 C4orf32Q8N8J7 132 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 CAVIN3Q969G5 261 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 KIF12Q96FN5 646 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 NCAPGQ9BPX3 1015 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 DDX23Q9BUQ8 820 aaKnown RBP17.27■□□□□ 0.36
SCAF1-201ENST00000360565 PNMA3Q9UL41 463 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 AGAP1Q9UPQ3 857 aa17.27■□□□□ 0.36
SCAF1-201ENST00000360565 USP15Q9Y4E8 981 aaPredicted RBP17.27■□□□□ 0.36
SCAF1-201ENST00000360565 NOL3O60936 208 aaKnown RBP17.27■□□□□ 0.35
SCAF1-201ENST00000360565 SRGAP2BP0DMP2 458 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 KITP10721 976 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 MUTP22033 750 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 GTF2H1P32780 548 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 ARFIP2P53365 341 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 ACTR2P61160 394 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 ANGEL2Q5VTE6 544 aaKnown RBP17.27■□□□□ 0.35
SCAF1-201ENST00000360565 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 CCDC68Q9H2F9 335 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 SENP1Q9P0U3 644 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 FIS1Q9Y3D6 152 aa17.27■□□□□ 0.35
SCAF1-201ENST00000360565 GAKO14976 1311 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 GZMAP12544 262 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 PDGFRAP16234 1089 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 DRP2Q13474 957 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 GPAT2Q6NUI2 795 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 GRAMD1AQ96CP6 724 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 CPSF2Q9P2I0 782 aaKnown RBP17.26■□□□□ 0.35
SCAF1-201ENST00000360565 A0A0A6YYK5 440 aaPredicted RBP17.26■□□□□ 0.35
SCAF1-201ENST00000360565 MAGEA4P43358 317 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
SCAF1-201ENST00000360565 RSPH3Q86UC2 560 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 KCNV2Q8TDN2 545 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 DHX38Q92620 1227 aaKnown RBP17.26■□□□□ 0.35
SCAF1-201ENST00000360565 MRC1P22897 1456 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 CFAP69A5D8W1 941 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 CFAP73A6NFT4 308 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 A8MXQ7 604 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 HUS1O60921 280 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 FNTAP49354 379 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 SLC12A3P55017 1021 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 ERVK-9P63128 1117 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 SH2D4BQ5SQS7 431 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 DSTYKQ6XUX3 929 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 SLC47A2Q86VL8 602 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 FAM193BQ96PV7 902 aaPredicted RBP17.26■□□□□ 0.35
SCAF1-201ENST00000360565 PPP1R9AQ9ULJ8 1098 aa17.26■□□□□ 0.35
SCAF1-201ENST00000360565 REXO2Q9Y3B8 237 aaKnown RBP17.26■□□□□ 0.35
SCAF1-201ENST00000360565 HOXA10P31260 410 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 SMTNL2Q2TAL5 461 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 HIPK4Q8NE63 616 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 BEST2Q8NFU1 509 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 CYTH2Q99418 400 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 ROPN1BQ9BZX4 212 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 VPS11Q9H270 941 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 C17orf75Q9HAS0 396 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 ROPN1Q9HAT0 212 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 CCDC195A0A1B0GUA6 201 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 CREB3O43889 395 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 CAND2O75155 1236 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 RRM1P23921 792 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 RGS7P49802 495 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 MXD4Q14582 209 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 SV2AQ7L0J3 742 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 FEZF2Q8TBJ5 459 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 TMBIM4Q9HC24 238 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 CST8O60676 142 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 SKIP12755 728 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 ADORA2BP29275 332 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 RARRES1P49788 294 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 PIGHQ14442 188 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 DBN1Q16643 649 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms