RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 LPAR1Q92633 364 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 APOL1O14791 398 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 SLC16A3O15427 465 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 WBP4O75554 376 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 MAP4P27816 1152 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 BCAR1P56945 870 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 SEC16BQ96JE7 1060 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 CLMNQ96JQ2 1002 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 SH2D3AQ9BRG2 576 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 TRIM62Q9BVG3 475 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 FAM96AQ9H5X1 160 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 MRPL40Q9NQ50 206 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 CASS4Q9NQ75 786 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 NDFIP2Q9NV92 336 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 PARVAQ9NVD7 372 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 CNOT7Q9UIV1 285 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 KCNN4O15554 427 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 CAMTA2O94983 1202 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 UBTFL6P0CB48 400 aaPredicted RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 CPB1P15086 417 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 TYK2P29597 1187 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 P3H1Q32P28 736 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 ZC3H12BQ5HYM0 836 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 NAF1Q96HR8 494 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 C19orf81C9J6K1 198 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 ENTPD3O75355 529 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 CNGA3Q16281 694 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 RFFLQ8WZ73 363 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 HIC2Q96JB3 615 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 ABCA6Q8N139 1617 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 PFASO15067 1338 aa12.85□□□□□ -0.35
CCDC144A-204ENST00000360524 VCPP55072 806 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 EIF3EP60228 445 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 RIN2Q8WYP3 895 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 NR1H4Q96RI1 486 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 SERPINB10P48595 397 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 BTBD8Q5XKL5 378 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 AGGF1Q8N302 714 aaeCLIP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 TRABDQ9H4I3 376 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 MAP3K20Q9NYL2 800 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 SETBP1Q9Y6X0 1596 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 ADCY3O60266 1144 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 CARSP49589 748 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 CCZ1BP86790 482 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 CCZ1P86791 482 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 CATSPER1Q8NEC5 780 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 KCNH4Q9UQ05 1017 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 OR6P1Q8NGX9 317 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 ZNF512BQ96KM6 892 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 TEX13BQ9BXU2 312 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 NOD2Q9HC29 1040 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 AGPAT5Q9NUQ2 364 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 ZNF70Q9UC06 446 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 MARCOQ9UEW3 520 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 ZSCAN9O15535 394 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 RALAP11233 206 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 IRAK1P51617 712 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 HIC1Q14526 733 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 HIF1AQ16665 826 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 ACCSLQ4AC99 568 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 TNIP3Q96KP6 325 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 PIDD1Q9HB75 910 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 PIN4Q9Y237 131 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 ATP11BQ9Y2G3 1177 aa12.84□□□□□ -0.35
CCDC144A-204ENST00000360524 SESN2P58004 480 aaPredicted RBP12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 PRAMEP78395 509 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 DHX34Q14147 1143 aaKnown RBP12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 CDC42EP5Q6NZY7 148 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 TAGAPQ8N103 731 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 LINC00116Q8NCU8 138 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 ZNF609O15014 1411 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 GGPS1O95749 300 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 LSP1P33241 339 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 CDC42EP1Q00587 391 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 E4F1Q66K89 784 aaPredicted RBP12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 C4orf33Q8N1A6 199 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 TMCO5AQ8N6Q1 288 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 OTULINQ96BN8 352 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 AGAP3Q96P47 875 aa12.83□□□□□ -0.36
CCDC144A-204ENST00000360524 SNX12Q9UMY4 172 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms