RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ZNF568Q3ZCX4 644 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 DUSP28Q4G0W2 176 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ZNF394Q53GI3 561 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MORN1Q5T089 497 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TRAPPC11Q7Z392 1133 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 PASD1Q8IV76 773 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 SLC17A8Q8NDX2 589 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CAGE1Q8TC20 777 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 HVCN1Q96D96 273 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ACO2Q99798 780 aaKnown RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 THAP2Q9H0W7 228 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 KDM4CQ9H3R0 1056 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 APOBEC3GQ9HC16 384 aaKnown RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 GPBP1L1Q9HC44 474 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 GABRQQ9UN88 632 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 SAR1BQ9Y6B6 198 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ADGRA2Q96PE1 1338 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 SIP14410 1827 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 SLC15A5A6NIM6 579 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 GPR25O00155 361 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TNPO2O14787 897 aaKnown RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MEFVO15553 781 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 FAM189A1O60320 539 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PHACTR2O75167 634 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ZRANB2O95218 330 aaKnown RBP eCLIP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MYL3P08590 195 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 FERP16591 822 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 CHRNB2P17787 502 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 CD58P19256 250 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 IBSPP21815 317 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PAX7P23759 505 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PRKCIP41743 596 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MAGEA8P43361 318 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 HTRA3P83110 453 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MBTD1Q05BQ5 628 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MAP2K5Q13163 448 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 LLGL1Q15334 1064 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 NAB2Q15742 525 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 C1QTNF12Q5T7M4 302 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ATF7IP2Q5U623 682 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 CDCA2Q69YH5 1023 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MTHFD1LQ6UB35 978 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 RUFY4Q6ZNE9 571 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TLK2Q86UE8 772 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ZBTB8OSQ8IWT0 167 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 GTF3C2Q8WUA4 911 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 LMBR1Q8WVP7 490 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 BTBD6Q96KE9 485 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 NT5C1BQ96P26 610 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 NOX5Q96PH1 765 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PNKPQ96T60 521 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 AGPAT1Q99943 283 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TLR10Q9BXR5 811 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MRPL4Q9BYD3 311 aaKnown RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TSGA10Q9BZW7 698 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MAF1Q9H063 256 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ABHD16BQ9H3Z7 469 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MYO1AQ9UBC5 1043 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 HES2Q9Y543 173 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 RPS6KL1Q9Y6S9 549 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 CNTNAP2Q9UHC6 1331 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ABLIM1O14639 778 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PJA2O43164 708 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 GFRA3O60609 400 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PPFIA4O75335 1185 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TOM1L1O75674 476 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PGK1P00558 417 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 C4BPAP04003 597 aaKnown RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TUBB4AP04350 444 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 SLC10A3P09131 477 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF865P0CJ78 1059 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 SCP2P22307 547 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 RAP1GAPP47736 663 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 GPC3P51654 580 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 HNRNPH2P55795 449 aaKnown RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MYL6P60660 151 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 GPS2Q13227 327 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 MXD4Q14582 209 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 PSMD6Q15008 389 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 DGKDQ16760 1214 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ZACNQ401N2 412 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 DAB2IPQ5VWQ8 1189 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 C17orf99Q6UX52 265 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 RSRC2Q7L4I2 434 aaKnown RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 SRGAP1Q7Z6B7 1085 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 FMNL3Q8IVF7 1028 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 EFCAB13Q8IY85 973 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 GSPT2Q8IYD1 628 aaKnown RBP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 KIAA0319LQ8IZA0 1049 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ABRAQ8N0Z2 381 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TRPV1Q8NER1 839 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TMC2Q8TDI7 906 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 EPS8L1Q8TE68 723 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 TCP11Q8WWU5 503 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 KAT2BQ92831 832 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 KHSRPQ92945 711 aaKnown RBP eCLIP5.46□□□□□ -1.54
ATXN3-202ENST00000359366 OSBPL9Q96SU4 736 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 SYT11Q9BT88 431 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 CDT1Q9H211 546 aa5.46□□□□□ -1.54
ATXN3-202ENST00000359366 ZNF446Q9NWS9 450 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms