RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FBXO25Q8TCJ0 367 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 FSD1LQ9BXM9 530 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 SLC40A1Q9NP59 571 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 MTMR2Q13614 643 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 UBN1Q9NPG3 1134 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 SALL1Q9NSC2 1324 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 SASH3O75995 380 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 RALAP11233 206 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 MDH1BQ5I0G3 518 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
VCP-201ENST00000358901 MXRA8Q9BRK3 442 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 TSSK1BQ9BXA7 367 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 TMEM8AQ9HCN3 771 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 KCNH7Q9NS40 1196 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 ADA2Q9NZK5 511 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 GTF3C4Q9UKN8 822 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 CHMP2BQ9UQN3 213 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 DIP2CQ9Y2E4 1556 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 TCRBV5S4A2TA0A5A2 114 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 CHEK2O96017 543 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 PRKCBP05771 671 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 TBX2Q13207 712 aaPredicted RBP14.47□□□□□ -0.09
VCP-201ENST00000358901 NME3Q13232 169 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 COL9A3Q14050 684 aaPredicted RBP14.47□□□□□ -0.09
VCP-201ENST00000358901 C3orf62Q6ZUJ4 267 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 KIF12Q96FN5 646 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 SPATA33Q96N06 139 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 KIFC3Q9BVG8 833 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 PSMC3IPQ9P2W1 217 aaPredicted RBP14.47□□□□□ -0.09
VCP-201ENST00000358901 ZSCAN5CA6NGD5 496 aaPredicted RBP14.47□□□□□ -0.09
VCP-201ENST00000358901 ASAP2O43150 1006 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 ENTPD3O75355 529 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 RBP3P10745 1247 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 RXRBP28702 533 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 RGS7P49802 495 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 DNAJC3Q13217 504 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 LRRC34Q8IZ02 419 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 SLC10A4Q96EP9 437 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 OSGEPQ9NPF4 335 aa14.47□□□□□ -0.09
VCP-201ENST00000358901 ZC3H7BQ9UGR2 993 aaKnown RBP14.47□□□□□ -0.09
VCP-201ENST00000358901 GSTA4O15217 222 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 CST8O60676 142 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 AKAP3O75969 853 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 ENO1P06733 434 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 PAMP19021 973 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 YWHAHQ04917 246 aaPredicted RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 C2CD6Q53TS8 623 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 NT5DC1Q5TFE4 455 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 SCFD1Q8WVM8 642 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 POLR3CQ9BUI4 534 aaPredicted RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 FBXO28Q9NVF7 368 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 SUN2Q9UH99 717 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 TRIM33Q9UPN9 1127 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 ATP9BO43861 1147 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 LRRC23Q53EV4 343 aaPredicted RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 CEP70Q8NHQ1 597 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 HDAC7Q8WUI4 952 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 ATG4AQ8WYN0 398 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 SIK2Q9H0K1 926 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 KRT82Q9NSB4 513 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 AGAP1Q9UPQ3 857 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 TYW5A2RUC4 315 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 KIAA0391O15091 583 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 NVLO15381 856 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 PAPOLAP51003 745 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 ALDH18A1P54886 795 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 INTS5Q6P9B9 1019 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 ZNF571Q7Z3V5 609 aaPredicted RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 KIAA0895Q8NCT3 520 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 SCG3Q8WXD2 468 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.46□□□□□ -0.095e-7■■■■■ 55
VCP-201ENST00000358901 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 ZSWIM1Q9BR11 485 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 TEX13BQ9BXU2 312 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 RANBP17Q9H2T7 1088 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 RAB21Q9UL25 225 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 SCAF8Q9UPN6 1271 aaKnown RBP14.46□□□□□ -0.09
VCP-201ENST00000358901 SLC4A7Q9Y6M7 1214 aa14.46□□□□□ -0.09
VCP-201ENST00000358901 AFF2P51816 1311 aa14.46□□□□□ -0.1
VCP-201ENST00000358901 P4HA2O15460 535 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 DEUP1Q05D60 604 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 NFIAQ12857 509 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 TMED1Q13445 227 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 TTLL4Q14679 1199 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 SMTNL2Q2TAL5 461 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 EFHC2Q5JST6 749 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 SCN4BQ8IWT1 228 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 RAPGEF5Q92565 580 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 AGAP3Q96P47 875 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 ACAP3Q96P50 834 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 TARS2Q9BW92 718 aaKnown RBP14.45□□□□□ -0.1
VCP-201ENST00000358901 ORC6Q9Y5N6 252 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 ARHGEF37A1IGU5 675 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 APOL1O14791 398 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 GRAP2O75791 330 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 WEE2P0C1S8 567 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 ELF1P32519 619 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 LONP2Q86WA8 852 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 RNF135Q8IUD6 432 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms