RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ANKS4BQ8N8V4 417 aa21.79■■□□□ 1.08
COL13A1-202ENST00000357811 TCP11Q8WWU5 503 aa21.79■■□□□ 1.08
COL13A1-202ENST00000357811 ZKSCAN4Q969J2 545 aaPredicted RBP21.79■■□□□ 1.08
COL13A1-202ENST00000357811 ANAPC5Q9UJX4 755 aa21.79■■□□□ 1.08
COL13A1-202ENST00000357811 COQ4Q9Y3A0 265 aa21.79■■□□□ 1.08
COL13A1-202ENST00000357811 CETPP11597 493 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 ATF2P15336 505 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 MPP2Q14168 576 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 NUGGCQ68CJ6 796 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 CCDC91Q7Z6B0 441 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 TBC1D1Q86TI0 1168 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 PNMA8AQ86V59 439 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 SRRM1Q8IYB3 904 aaKnown RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 MFSD14AQ96MC6 490 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 CNOT7Q9UIV1 285 aaKnown RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 ZSCAN5DPP0CG00 497 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 UNGP13051 313 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 PRKCEQ02156 737 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 TDRD10Q5VZ19 366 aaKnown RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 SNRNP48Q6IEG0 339 aaKnown RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 SAMD7Q7Z3H4 446 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 ZNF526Q8TF50 670 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 TBC1D31Q96DN5 1066 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 FAM212AQ96EL1 285 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 ST6GALNAC4Q9H4F1 302 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 PCDHB4Q9Y5E5 795 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 MYPNQ86TC9 1320 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 LRRIQ4A6NIV6 560 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 MYCNP04198 464 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 EN1Q05925 392 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-202ENST00000357811 NIPA1Q7RTP0 329 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 NIM1KQ8IY84 436 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 GLIS1Q8NBF1 620 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 VTI1AQ96AJ9 217 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 MYOZ2Q9NPC6 264 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 GGA2Q9UJY4 613 aa21.78■■□□□ 1.08
COL13A1-202ENST00000357811 ZNFX1Q9P2E3 1918 aaKnown RBP21.77■■□□□ 1.08
COL13A1-202ENST00000357811 TBC1D12O60347 775 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 ZBED4O75132 1171 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 PIAS1O75925 651 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 RGS20O76081 388 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 CLTAP09496 248 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 PSEN1P49768 467 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 WDR44Q5JSH3 913 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 ACTR5Q9H9F9 607 aaPredicted RBP21.77■■□□□ 1.08
COL13A1-202ENST00000357811 DPEP1P16444 411 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 ATF7P17544 494 aaPredicted RBP21.77■■□□□ 1.08
COL13A1-202ENST00000357811 SPDYCQ5MJ68 293 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 PARP9Q8IXQ6 854 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 SNF8Q96H20 258 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 PLVAPQ9BX97 442 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 DCLK3Q9C098 648 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 ANKEF1Q9NU02 776 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 ADAM22Q9P0K1 906 aa21.77■■□□□ 1.08
COL13A1-202ENST00000357811 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.77■■□□□ 1.08
COL13A1-202ENST00000357811 VWA5AO00534 786 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 ETS1P14921 441 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 IVDP26440 423 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 BRDTQ58F21 947 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 ZNF365Q70YC5 407 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 TAOK1Q7L7X3 1001 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 MORC4Q8TE76 937 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 DDX27Q96GQ7 796 aaKnown RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 ZNF668Q96K58 619 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 APOBEC3GQ9HC16 384 aaKnown RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 PGAP2Q9UHJ9 254 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 BAIAP2L1Q9UHR4 511 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 TPX2Q9ULW0 747 aaKnown RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 RPL7AP62424 266 aaKnown RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 TCEAL1Q15170 157 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 C3orf20Q8ND61 904 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 CENPTQ96BT3 561 aa21.76■■□□□ 1.07
COL13A1-202ENST00000357811 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 ZNF646O15015 1829 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-202ENST00000357811 BRAFP15056 766 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 SFNP31947 248 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 FAM83AQ86UY5 434 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 RUNDC3BQ96NL0 473 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 TARS2Q9BW92 718 aaKnown RBP21.75■■□□□ 1.07
COL13A1-202ENST00000357811 HAPLN2Q9GZV7 340 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 DEFB129Q9H1M3 183 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 MAPK13O15264 365 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 GAS8O95995 478 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 HMGCS2P54868 508 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 FSTL1Q12841 308 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 PRKG1Q13976 671 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 NBPF12Q5TAG4 269 aaPredicted RBP21.75■■□□□ 1.07
COL13A1-202ENST00000357811 VSTM1Q6UX27 236 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 ARMC9Q7Z3E5 817 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 FAM228AQ86W67 206 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 TMC2Q8TDI7 906 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 IFT74Q96LB3 600 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 CXorf56Q9H5V9 222 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 CYP26B1Q9NR63 512 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 NINJ2Q9NZG7 142 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 ZNRF3Q9ULT6 936 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 AGAP1Q9UPQ3 857 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 PCDHB2Q9Y5E7 798 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 ZNF541Q9H0D2 1346 aa21.75■■□□□ 1.07
COL13A1-202ENST00000357811 TTC4O95801 387 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms