RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 C17orf53Q8N3J3 647 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 NKD1Q969G9 470 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 TNIP3Q96KP6 325 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 MYOCQ99972 504 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 KATNAL1Q9BW62 490 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 KLHL31Q9H511 634 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 RNF146Q9NTX7 359 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 APOBEC2Q9Y235 224 aaKnown RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 SH3GLB1Q9Y371 365 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 MRPL42Q9Y6G3 142 aaKnown RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 EIF4G3O43432 1585 aaKnown RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 ZMYM3Q14202 1370 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 SMIM22K7EJ46 135 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 STRNO43815 780 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 SUN1O94901 812 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 URODP06132 367 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 ABCB1P08183 1280 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 GAP43P17677 238 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 CHRNA5P30532 468 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 MCCD1P59942 119 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 SNAPC2Q13487 334 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 TMEM132DQ14C87 1099 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 RNF19BQ6ZMZ0 732 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 CENPUQ71F23 418 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 PARGQ86W56 976 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 MCEMP1Q8IX19 187 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 AGGF1Q8N302 714 aaeCLIP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 CYGBQ8WWM9 190 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 RNF25Q96BH1 459 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 TUT1Q9H6E5 874 aaKnown RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 EML4Q9HC35 981 aaKnown RBP6.09□□□□□ -1.43
BRCA1-203ENST00000357654 CNGB3Q9NQW8 809 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 ZFATQ9P243 1243 aa6.09□□□□□ -1.43
BRCA1-203ENST00000357654 PARNO95453 639 aaKnown RBP6.09□□□□□ -1.44
BRCA1-203ENST00000357654 ZFXP17010 805 aaPredicted RBP6.09□□□□□ -1.44
BRCA1-203ENST00000357654 HOXC12P31275 282 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 CRKP46108 304 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 PRIM2P49643 509 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 ARF3P61204 181 aaPredicted RBP6.09□□□□□ -1.44
BRCA1-203ENST00000357654 ARF1P84077 181 aaKnown RBP6.09□□□□□ -1.44
BRCA1-203ENST00000357654 TRMT11Q7Z4G4 463 aaKnown RBP6.09□□□□□ -1.44
BRCA1-203ENST00000357654 IFNEQ86WN2 208 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 MICALL2Q8IY33 904 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 CLEC4FQ8N1N0 589 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 PPM1NQ8N819 430 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 MLKLQ8NB16 471 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 RDM1Q8NG50 284 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 SEC31BQ9NQW1 1179 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 KLK14Q9P0G3 267 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 CTNNAL1Q9UBT7 734 aa6.09□□□□□ -1.44
BRCA1-203ENST00000357654 LIMA1Q9UHB6 759 aaKnown RBP6.09□□□□□ -1.44
BRCA1-203ENST00000357654 E7EWF7 191 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 PSMD14O00487 310 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 AVPR1AP37288 418 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 AMPD2Q01433 879 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 CYP24A1Q07973 514 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 ASPRV1Q53RT3 343 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 SPATA1Q5VX52 437 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 DPP10Q8N608 796 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 TRIM58Q8NG06 486 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 SLC7A14Q8TBB6 771 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 FAR1Q8WVX9 515 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 RBM41Q96IZ5 413 aaKnown RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 DHX36Q9H2U1 1008 aaKnown RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 KANSL2Q9H9L4 492 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 CERS4Q9HA82 394 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 GID8Q9NWU2 228 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 CYP39A1Q9NYL5 469 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 NAGPAQ9UK23 515 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 ABCC11Q96J66 1382 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 SNTNA6NMZ2 147 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L10C9JJH3 530 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 KIF1CO43896 1103 aaKnown RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 POU1F1P28069 291 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 CLK2P49760 499 aaKnown RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 MTMR2Q13614 643 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 EDRF1Q3B7T1 1238 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 TRAF7Q6Q0C0 670 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 SHCBP1Q8NEM2 672 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 PRIMPOLQ96LW4 560 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 GLT1D1Q96MS3 346 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 PRPF18Q99633 342 aaKnown RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 SNX14Q9Y5W7 946 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 NKTRP30414 1462 aaKnown RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 FAM107AO95990 144 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 AKT2P31751 481 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 MLH1P40692 756 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 KCNJ5P48544 419 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 HSD17B4P51659 736 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 PDX1P52945 283 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 NCAPHQ15003 741 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 POLD3Q15054 466 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 UAP1L1Q3KQV9 507 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 BNIPLQ7Z465 357 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 COLGALT2Q8IYK4 626 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 TMA16Q96EY4 203 aaKnown RBP6.08□□□□□ -1.44
BRCA1-203ENST00000357654 OMDQ99983 421 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 NUP85Q9BW27 656 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 ADAM33Q9BZ11 813 aa6.08□□□□□ -1.44
BRCA1-203ENST00000357654 GREM2Q9H772 168 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms