RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CYFIP1Q7L576 1253 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 DDX42Q86XP3 938 aaKnown RBP eCLIP15.61■□□□□ 0.09
CHD4-201ENST00000357008 FUT8Q9BYC5 575 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TRIM54Q9BYV2 358 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TRIM45Q9H8W5 580 aaPredicted RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 MARCOQ9UEW3 520 aaPredicted RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 MRPS15P82914 257 aaKnown RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 RBBP7Q16576 425 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TWF2Q6IBS0 349 aaKnown RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 ENGASEQ8NFI3 743 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 NSL1Q96IY1 281 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 OSBPL8Q9BZF1 889 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 PNMA3Q9UL41 463 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 TBX3O15119 743 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 AKAP10O43572 662 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 FDX1P10109 184 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 PLA2G4AP47712 749 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 CYLC2Q14093 348 aaPredicted RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 USP49Q70CQ1 688 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 CPA5Q8WXQ8 436 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 TMA16Q96EY4 203 aaKnown RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 REEP2Q9BRK0 252 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 KCND2Q9NZV8 630 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 NARFQ9UHQ1 456 aa15.61■□□□□ 0.09
CHD4-201ENST00000357008 PAIP2BQ9ULR5 123 aaKnown RBP15.61■□□□□ 0.09
CHD4-201ENST00000357008 COMTP21964 271 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 YWHABP31946 246 aaKnown RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 PALMDQ9NP74 551 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 IRAK4Q9NWZ3 460 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 AIPL1Q9NZN9 384 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 ADCY3O60266 1144 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 SNRPAP09012 282 aaKnown RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 KLRC1P26715 233 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 SSTR3P32745 418 aaPredicted RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 CENPCQ03188 943 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 COL23A1Q86Y22 540 aaPredicted RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 PAWRQ96IZ0 340 aaKnown RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 SUGT1Q9Y2Z0 365 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 ALG6Q9Y672 507 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 NEMP1O14524 444 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 CDH2P19022 906 aaPredicted RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 HSD17B3P37058 310 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 VHLP40337 213 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 SLC29A2Q14542 456 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 LVRNQ6Q4G3 990 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 TRAPPC11Q7Z392 1133 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 FAM84BQ96KN1 310 aaPredicted RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 PLA2R1Q13018 1463 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 CYB5D1Q6P9G0 228 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 PPHLN1Q8NEY8 458 aaKnown RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 SERPINB12Q96P63 405 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 CELF4Q9BZC1 486 aaKnown RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 A2ML1A8K2U0 1454 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 GFAPP14136 432 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 AKR1B1P15121 316 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 SLC9A1P19634 815 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 HSD17B4P51659 736 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 NKX1-1Q15270 411 aaPredicted RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 PATL1Q86TB9 770 aaKnown RBP15.6■□□□□ 0.09
CHD4-201ENST00000357008 PCDHGB4Q9UN71 923 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 LZTS1Q9Y250 596 aa15.6■□□□□ 0.09
CHD4-201ENST00000357008 ACADSP16219 412 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 ITGA8P53708 1063 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 C3orf62Q6ZUJ4 267 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 ADCK1Q86TW2 530 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 APLFQ8IW19 511 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 PCYOX1LQ8NBM8 494 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 PSMD3O43242 534 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 WEE2P0C1S8 567 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 H2AFXP16104 143 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 STILQ15468 1287 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 SETD3Q86TU7 594 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 CLMNQ96JQ2 1002 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 EPAS1Q99814 870 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 LBHD1Q9BQE6 289 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 MMTAG2Q9BU76 263 aaKnown RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 CASS4Q9NQ75 786 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 PCMTD2Q9NV79 361 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 DLGAP2Q9P1A6 1054 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 MAD2L2Q9UI95 211 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 C3orf70A6NLC5 250 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 FDPSP14324 419 aaKnown RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 LMBRD2Q68DH5 695 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 ASAP3Q8TDY4 903 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 SCFD1Q8WVM8 642 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 MANSC1Q9H8J5 431 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 PPP1R3GB7ZBB8 358 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 KRT16P08779 473 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 SERPINB3P29508 390 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 PPP1R36Q96LQ0 422 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 PNKPQ96T60 521 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 CDK17Q00537 523 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 RNF219Q5W0B1 726 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 ZNF560Q96MR9 790 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 MKNK1Q9BUB5 465 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 PAK5Q9P286 719 aa15.59■□□□□ 0.09
CHD4-201ENST00000357008 NPHP4O75161 1426 aaPredicted RBP15.59■□□□□ 0.09
CHD4-201ENST00000357008 PNPLA6Q8IY17 1366 aa15.58■□□□□ 0.09
CHD4-201ENST00000357008 PDGFRAP16234 1089 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms