RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 AMACRQ9UHK6 382 aa14.89□□□□□ -0.03
LSS-201ENST00000356396 PTPN22Q9Y2R2 807 aa14.89□□□□□ -0.03
LSS-201ENST00000356396 HBP1O60381 514 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 TOM1L1O75674 476 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 FAM153BP0C7A2 387 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 H2AFXP16104 143 aaPredicted RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 CDK17Q00537 523 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 FAM153CQ494X1 144 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 DNAJC21Q5F1R6 531 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 CC2D1AQ6P1N0 951 aaPredicted RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 CTU1Q7Z7A3 348 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 HAUS1Q96CS2 278 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 ZMAT2Q96NC0 199 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 NUP85Q9BW27 656 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 FAM153AQ9UHL3 310 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 MYO15AQ9UKN7 3530 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 FAM189A1O60320 539 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 DKC1O60832 514 aaKnown RBP eCLIP14.88□□□□□ -0.03
LSS-201ENST00000356396 LCA5LO95447 670 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 SMIM10L2AP0DMW4 78 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 SMIM10L2BP0DMW5 78 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 PDE6CP51160 858 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 RPS6KA1Q15418 735 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 LONRF2Q1L5Z9 754 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 WDR44Q5JSH3 913 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 UBAP2Q5T6F2 1119 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 ANKRD23Q86SG2 305 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 EMC1Q8N766 993 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 C1orf131Q8NDD1 294 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 HASPINQ8TF76 798 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 TRIB2Q92519 343 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 FBXL18Q96ME1 805 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 TRIM51Q9BSJ1 452 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 FAM49BQ9NUQ9 324 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 SPTBN5Q9NRC6 3674 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 FGGP02679 453 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 CYP2C9P11712 490 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 POLR2BP30876 1174 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 CARSP49589 748 aaKnown RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 MFAP3P55082 362 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 GUCY2DQ02846 1103 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 TRPC3Q13507 836 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 SYCP2LQ5T4T6 812 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 IER5Q5VY09 327 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 ATG4AQ8WYN0 398 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 HERPUD2Q9BSE4 406 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 SDCBP2Q9H190 292 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 TUBGCP4Q9UGJ1 667 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 PNMA2Q9UL42 364 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 TIMM13Q9Y5L4 95 aaPredicted RBP14.88□□□□□ -0.03
LSS-201ENST00000356396 ALG6Q9Y672 507 aa14.88□□□□□ -0.03
LSS-201ENST00000356396 MYO7AQ13402 2215 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 ARID2Q68CP9 1835 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 TULP2O00295 520 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 ABLIM1O14639 778 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 ERLIN2O94905 339 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 HOXC6P09630 235 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 COMTP21964 271 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 CCND3P30281 292 aaPredicted RBP14.87□□□□□ -0.03
LSS-201ENST00000356396 GNA15P30679 374 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 LAMC2Q13753 1193 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 DUSP28Q4G0W2 176 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 VPS36Q86VN1 386 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 FAM71AQ8IYT1 594 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 RBBP8NLQ8NC74 664 aaPredicted RBP14.87□□□□□ -0.03
LSS-201ENST00000356396 SHC3Q92529 594 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 ADGRA2Q96PE1 1338 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 A0A0C4DFX4 3053 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 SLC26A4O43511 780 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 PDGFRBP09619 1106 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 RGS7P49802 495 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 PTENP60484 403 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 BMS1Q14692 1282 aaKnown RBP14.87□□□□□ -0.03
LSS-201ENST00000356396 TXNRD3NBQ6F5E7 133 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 ZDHHC14Q8IZN3 488 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 AFAP1L1Q8TED9 768 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 CCDC113Q9H0I3 377 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 ABHD16BQ9H3Z7 469 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 ST6GALNAC4Q9H4F1 302 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 SLC5A4Q9NY91 659 aa14.87□□□□□ -0.03
LSS-201ENST00000356396 CNOT8Q9UFF9 292 aaKnown RBP14.87□□□□□ -0.03
LSS-201ENST00000356396 PIN4Q9Y237 131 aaKnown RBP14.87□□□□□ -0.03
LSS-201ENST00000356396 DIS3Q9Y2L1 958 aaKnown RBP14.87□□□□□ -0.03
LSS-201ENST00000356396 I3L4J1 428 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 LGR5O75473 907 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 SF3A3Q12874 501 aaKnown RBP eCLIP14.86□□□□□ -0.034e-7■■■■□ 19.7
LSS-201ENST00000356396 MAP2K5Q13163 448 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 SMTNL2Q2TAL5 461 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 SLC10A6Q3KNW5 377 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 MEI1Q5TIA1 1274 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 NDRG1Q92597 394 aaKnown RBP14.86□□□□□ -0.03
LSS-201ENST00000356396 PIWIL1Q96J94 861 aaKnown RBP14.86□□□□□ -0.03
LSS-201ENST00000356396 SYT11Q9BT88 431 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 SIX4Q9UIU6 781 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 ANAPC7Q9UJX3 599 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 NFU1Q9UMS0 254 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 AGAP1Q9UPQ3 857 aa14.86□□□□□ -0.03
LSS-201ENST00000356396 UBE4BO95155 1302 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms