RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 C20orf96Q9NUD7 363 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 ZHX2Q9Y6X8 837 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 PLA2G4AP47712 749 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 CAPZA2P47755 286 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 ERFP50548 548 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 CACNB2Q08289 660 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 USP10Q14694 798 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 LONRF1Q17RB8 773 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 TNIP2Q8NFZ5 429 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 PTPRN2Q92932 1015 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 CYBBP04839 570 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 ITIH2P19823 946 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 COPB2P35606 906 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 SPATA2LQ8IUW3 424 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 MYO3BQ8WXR4 1341 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 CPVLQ9H3G5 476 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 TASP1Q9H6P5 420 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 OLFML3Q9NRN5 406 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 ZC3H7BQ9UGR2 993 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 ZC3H4Q9UPT8 1303 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 NMT2O60551 498 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 TBL3Q12788 808 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 LUZP2Q86TE4 346 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 SNX31Q8N9S9 440 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 PSD3Q9NYI0 1048 aa15.63■□□□□ 0.09
LMX1B-201ENST00000355497 FBXO2Q9UK22 296 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 PAIP2BQ9ULR5 123 aaKnown RBP15.63■□□□□ 0.09
LMX1B-201ENST00000355497 SYCP2LQ5T4T6 812 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 YAF2Q8IY57 180 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 ADGRF4Q8IZF3 695 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 ATPAF2Q8N5M1 289 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 C2orf69Q8N8R5 385 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 SENP7Q9BQF6 1050 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 YIPF2Q9BWQ6 316 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 PPCSQ9HAB8 311 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 BATF3Q9NR55 127 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 MRGBPQ9NV56 204 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 NSMCE4AQ9NXX6 385 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 GOLGA8TH3BQL2 631 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 M0R3G1 203 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 OLFML2BQ68BL8 750 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 NUDT18Q6ZVK8 323 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 DDX53Q86TM3 631 aaKnown RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 ARHGEF26Q96DR7 871 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 ZNF668Q96K58 619 aaPredicted RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 PRPF18Q99633 342 aaKnown RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 PCMTD2Q9NV79 361 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 HSPBP1Q9NZL4 362 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 SUPT3HB4E1H0 165 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 ZNF200P98182 395 aaPredicted RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 ADCK2Q7Z695 626 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 OSBPL10Q9BXB5 764 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 SNX12Q9UMY4 172 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 TSC22D4Q9Y3Q8 395 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 CYFIP1Q7L576 1253 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 TRIM69Q86WT6 500 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 RBM15Q96T37 977 aaKnown RBP eCLIP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 CD274Q9NZQ7 290 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 MTO1Q9Y2Z2 717 aaKnown RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 FCER1AP12319 257 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 VSNL1P62760 191 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 GALNT4Q8N4A0 578 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 MARCH10Q8NA82 808 aaPredicted RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 KRT35Q92764 455 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 CNBD2Q96M20 576 aa15.62■□□□□ 0.09
LMX1B-201ENST00000355497 EXOSC4Q9NPD3 245 aaKnown RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 SRP68Q9UHB9 627 aaKnown RBP15.62■□□□□ 0.09
LMX1B-201ENST00000355497 NDUFS3O75489 264 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 EFNA5P52803 228 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 TTLL6Q8N841 843 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 VIPAS39Q9H9C1 493 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 POLE3Q9NRF9 147 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 GID8Q9NWU2 228 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 PKP3Q9Y446 797 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 PP2D1A8MPX8 630 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 KIAA0391O15091 583 aaKnown RBP15.61■□□□□ 0.09
LMX1B-201ENST00000355497 CCND1P24385 295 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 AKT1P31749 480 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 AASDHQ4L235 1098 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-201ENST00000355497 SLC35G2Q8TBE7 412 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 AGAP3Q96P47 875 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 WRNIP1Q96S55 665 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 TRIM51Q9BSJ1 452 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 MRPS26Q9BYN8 205 aaKnown RBP15.61■□□□□ 0.09
LMX1B-201ENST00000355497 ANGPT1Q15389 498 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 HAUS6Q7Z4H7 955 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 C18orf8Q96DM3 657 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 SGSM3Q96HU1 749 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 FAM47DPA6NHR8 397 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 H7C1W4 665 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 PDXKO00764 312 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 CYTH3O43739 400 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 SERPINB1P30740 379 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 USP11P51784 963 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 IRX1P78414 480 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-201ENST00000355497 WLSQ5T9L3 541 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 AGBL2Q5U5Z8 902 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 MB21D2Q8IYB1 491 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms