RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ATP8B4Q8TF62 1192 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 PRPF31Q8WWY3 499 aaKnown RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 RAPGEF5Q92565 580 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 KIFAP3Q92845 792 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 ZBTB45Q96K62 511 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 TRIM51Q9BSJ1 452 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 TRIM31Q9BZY9 425 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 AZI2Q9H6S1 392 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 GNEQ9Y223 722 aaKnown RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 UTP11Q9Y3A2 253 aaKnown RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 DNM1LO00429 736 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 DKC1O60832 514 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 ADRB2P07550 413 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 PAEPP09466 180 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 TRIM49P0CI25 452 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 TRIM49CP0CI26 452 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 CNGA1P29973 690 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 WNT7BP56706 349 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 GSCP56915 257 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 DMP1Q13316 513 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 LAMC2Q13753 1193 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 BYSLQ13895 437 aaKnown RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 KRT71Q3SY84 523 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 FAM160B1Q5W0V3 765 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SCARA3Q6AZY7 606 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 CCDC91Q7Z6B0 441 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 GLYCTKQ8IVS8 523 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SYCP3Q8IZU3 236 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 C3orf20Q8ND61 904 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 MCPH1Q8NEM0 835 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 PPTC7Q8NI37 304 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SLC30A5Q8TAD4 765 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SLC35G2Q8TBE7 412 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SPIRE2Q8WWL2 714 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SAAL1Q96ER3 474 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 SEC16BQ96JE7 1060 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 HHIPL1Q96JK4 782 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 JPH2Q9BR39 696 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 TIPINQ9BVW5 301 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 METTL14Q9HCE5 456 aaKnown RBP9.22□□□□□ -0.93
TRIM55-204ENST00000353317 CD248Q9HCU0 757 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 KLC4Q9NSK0 619 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 NRBP2Q9NSY0 501 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 INTUQ9ULD6 942 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 ATP8A1Q9Y2Q0 1164 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 ATP8B3O60423 1300 aa9.22□□□□□ -0.93
TRIM55-204ENST00000353317 TNPO2O14787 897 aaKnown RBP9.21□□□□□ -0.93
TRIM55-204ENST00000353317 DYNC1LI2O43237 492 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CSDE1O75534 798 aaKnown RBP9.21□□□□□ -0.93
TRIM55-204ENST00000353317 INSRRP14616 1297 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CLCN3P51790 818 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 IGBP1P78318 339 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 SREBF2Q12772 1141 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 NFIL3Q16649 462 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CBWD6Q4V339 395 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CBWD3Q5JTY5 395 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CBWD5Q5RIA9 395 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 MARCH8Q5T0T0 291 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CCDC121Q6ZUS5 278 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 ADAT2Q7Z6V5 191 aaKnown RBP9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CBWD2Q8IUF1 395 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 MAP4K3Q8IVH8 894 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-204ENST00000353317 EMID1Q96A84 441 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-204ENST00000353317 ELMO3Q96BJ8 720 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 CAPNS2Q96L46 248 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 ACCSQ96QU6 501 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 TXLNGYQ9BZA5 131 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 SMARCAD1Q9H4L7 1026 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 AMFRQ9UKV5 643 aa9.21□□□□□ -0.93
TRIM55-204ENST00000353317 TTC7AQ9ULT0 858 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-204ENST00000353317 C5orf60A6NFR6 353 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 SLC16A3O15427 465 aaKnown RBP9.21□□□□□ -0.94
TRIM55-204ENST00000353317 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.94
TRIM55-204ENST00000353317 PPFIA2O75334 1257 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 MMP3P08254 477 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 IQCF3P0C7M6 154 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 FERP16591 822 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 ABCB4P21439 1286 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 RPL13P26373 211 aaKnown RBP9.21□□□□□ -0.94
TRIM55-204ENST00000353317 PSMC4P43686 418 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 RTP1P59025 263 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 TNFAIP2Q03169 654 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 DEFB115Q30KQ5 88 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 ZBTB41Q5SVQ8 909 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 FAM186BQ8IYM0 893 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 MDM1Q8TC05 714 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 SLC7A3Q8WY07 619 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 TRIB2Q92519 343 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 FMO2Q99518 471 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 POP1Q99575 1024 aaKnown RBP9.21□□□□□ -0.94
TRIM55-204ENST00000353317 ERVK-5Q9HDB9 667 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 SLC40A1Q9NP59 571 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 FAM114A2Q9NRY5 505 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 HSPBP1Q9NZL4 362 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 TRPC6Q9Y210 931 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 UBE4BO95155 1302 aa9.21□□□□□ -0.94
TRIM55-204ENST00000353317 GOLGA6L7A0A1B0GV03 622 aa9.2□□□□□ -0.94
TRIM55-204ENST00000353317 GTPBP10A4D1E9 387 aaKnown RBP9.2□□□□□ -0.94
TRIM55-204ENST00000353317 LRRIQ4A6NIV6 560 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms