RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 UGT2A3Q6UWM9 527 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 UBL4BQ8N7F7 174 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 SLC30A5Q8TAD4 765 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 C1orf54Q8WWF1 131 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 NUDT12Q9BQG2 462 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 GRIP2Q9C0E4 1043 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 WHRNQ9P202 907 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 FAF1Q9UNN5 650 aaPredicted RBP14.03□□□□□ -0.16
IFT88-202ENST00000351808 HEMK1Q9Y5R4 338 aaPredicted RBP14.03□□□□□ -0.16
IFT88-202ENST00000351808 STK24Q9Y6E0 443 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
IFT88-202ENST00000351808 E9PBE3 544 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 H3BRJ5 948 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 CIB2O75838 187 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 GSTT2P0CG29 244 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 GSTT2BP0CG30 244 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 KRT15P19012 456 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 SLC5A2P31639 672 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 CA8P35219 290 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 HIRAP54198 1017 aaPredicted RBP14.02□□□□□ -0.16
IFT88-202ENST00000351808 ACTR3P61158 418 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 NAA20P61599 178 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 ITGA7Q13683 1181 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 NCOA4Q13772 614 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 MYLK3Q32MK0 819 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 CYP4F22Q6NT55 531 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 LVRNQ6Q4G3 990 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 Q6ZNX1 250 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 HEATR3Q7Z4Q2 680 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 PATL1Q86TB9 770 aaKnown RBP14.02□□□□□ -0.16
IFT88-202ENST00000351808 BBS5Q8N3I7 341 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 MRRFQ96E11 262 aaKnown RBP14.02□□□□□ -0.16
IFT88-202ENST00000351808 THTPAQ9BU02 230 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 ZDHHC7Q9NXF8 308 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 CHORDC1Q9UHD1 332 aaPredicted RBP14.02□□□□□ -0.16
IFT88-202ENST00000351808 MTUS1Q9ULD2 1270 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 STX8Q9UNK0 236 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 DOLKQ9UPQ8 538 aa14.02□□□□□ -0.16
IFT88-202ENST00000351808 C15orf38-AP3S2A0A0A6YYH1 394 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 POC1B-GALNT4F8VUJ3 575 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 PDE8BO95263 885 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 ATP6V1B1P15313 513 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 RXRGP48443 463 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 PDE1BQ01064 536 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 EVX2Q03828 476 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 NR1H3Q13133 447 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 DCAF17Q5H9S7 520 aaPredicted RBP14.02□□□□□ -0.17
IFT88-202ENST00000351808 C6orf163Q5TEZ5 329 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 C1orf146Q5VVC0 180 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 NET1Q7Z628 596 aaPredicted RBP14.02□□□□□ -0.17
IFT88-202ENST00000351808 ARPINQ7Z6K5 226 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 VGLL2Q8N8G2 317 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 CCDC110Q8TBZ0 833 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 ZNF398Q8TD17 642 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 OSBPL8Q9BZF1 889 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 KLHL4Q9C0H6 718 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 RBM38Q9H0Z9 239 aaKnown RBP14.02□□□□□ -0.17
IFT88-202ENST00000351808 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
IFT88-202ENST00000351808 ATP8B3O60423 1300 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 GSTTP1A0A1W2PQM5 241 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 BIRC5O15392 142 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 PRPF4O43172 522 aaKnown RBP eCLIP14.01□□□□□ -0.17
IFT88-202ENST00000351808 NDUFB5O43674 189 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 STRNO43815 780 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 ITIH2P19823 946 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 ANXA13P27216 316 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 RELAQ04206 551 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 LPIN1Q14693 890 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 STAT4Q14765 748 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 CYP1B1Q16678 543 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SLC13A5Q86YT5 568 aaPredicted RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 PYDC1Q8WXC3 89 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 RAD54LQ92698 747 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 ZSWIM1Q9BR11 485 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 GREM2Q9H772 168 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 KIAA1586Q9HCI6 787 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 STK17AQ9UEE5 414 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 TJP1Q07157 1748 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 MAGEC1O60732 1142 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 TRMUO75648 421 aaKnown RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 JAM2P57087 298 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 KIF22Q14807 665 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SIX1Q15475 284 aaPredicted RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 TRMT5Q32P41 509 aaKnown RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 FOXR2Q6PJQ5 311 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SLC2A7Q6PXP3 512 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SIX2Q9NPC8 291 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 ARHGEF4Q9NR80 690 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SLC7A8Q9UHI5 535 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 TNRQ92752 1358 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 NDC80O14777 642 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 DLATP10515 647 aaKnown RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 STAT1P42224 750 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 HDAC4P56524 1084 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 ACAP1Q15027 740 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 PAOXQ6QHF9 649 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 RNF111Q6ZNA4 994 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms