RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ANGPTL8Q6UXH0 198 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 FAM167BQ9BTA0 163 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 FUCA2Q9BTY2 467 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 FAM96AQ9H5X1 160 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 ERFP50548 548 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 DACT3Q96B18 629 aaPredicted RBP16.88■□□□□ 0.29
PTPN11-201ENST00000351677 TAAR1Q96RJ0 339 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 PNKPQ96T60 521 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 RAB6BQ9NRW1 208 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 FBXO28Q9NVF7 368 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 STOML1Q9UBI4 398 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 TMEM132DQ14C87 1099 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 TMEM259Q4ZIN3 620 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 MDH1BQ5I0G3 518 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 FRMPD1Q5SYB0 1578 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 TRIML2Q8N7C3 387 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTPN11-201ENST00000351677 KIDINS220Q9ULH0 1771 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 FASTKD1Q53R41 847 aaKnown RBP16.88■□□□□ 0.29
PTPN11-201ENST00000351677 ANGEL2Q5VTE6 544 aaKnown RBP16.88■□□□□ 0.29
PTPN11-201ENST00000351677 FASTKD5Q7L8L6 764 aaKnown RBP16.88■□□□□ 0.29
PTPN11-201ENST00000351677 PPP1R36Q96LQ0 422 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 TRIM15Q9C019 465 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 TRPV6Q9H1D0 765 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 XAB2Q9HCS7 855 aaKnown RBP16.88■□□□□ 0.29
PTPN11-201ENST00000351677 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 XPO7Q9UIA9 1087 aaKnown RBP16.88■□□□□ 0.29
PTPN11-201ENST00000351677 TECPR2O15040 1411 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 JCADQ9P266 1359 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 PRAMEP78395 509 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 MORF4L2Q15014 288 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 ZBTB41Q5SVQ8 909 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 ICE2Q659A1 982 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 GRAMD1AQ96CP6 724 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 SPON2Q9BUD6 331 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 AGPAT3Q9NRZ7 376 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 MEGF6O75095 1541 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 MEFVO15553 781 aaPredicted RBP16.87■□□□□ 0.29
PTPN11-201ENST00000351677 PFDN1O60925 122 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 RBP5P82980 135 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SMTNL2Q2TAL5 461 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 RBM43Q6ZSC3 357 aaKnown RBP16.87■□□□□ 0.29
PTPN11-201ENST00000351677 NCLNQ969V3 563 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 TNIP3Q96KP6 325 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 POLR3CQ9BUI4 534 aaPredicted RBP16.87■□□□□ 0.29
PTPN11-201ENST00000351677 OSBPL8Q9BZF1 889 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 THAP2Q9H0W7 228 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 ZFATQ9P243 1243 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 L3MBTL1Q9Y468 752 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 PCDHB2Q9Y5E7 798 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 KYAT1Q16773 422 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 MMGT1Q8N4V1 131 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 URGCPQ8TCY9 931 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SYN2Q92777 582 aaPredicted RBP16.87■□□□□ 0.29
PTPN11-201ENST00000351677 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 ZBTB18Q99592 522 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 MAGEB5Q9BZ81 275 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SEC23AQ15436 765 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 BTBD8Q5XKL5 378 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 KLC4Q9NSK0 619 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 A0A087X0T9 212 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 FAM228BP0C875 321 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 ACTR2P61160 394 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 TXNRD3Q86VQ6 643 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SLC8A2Q9UPR5 921 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 CCDC78A2IDD5 438 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 FGFR2P21802 821 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 PIGHQ14442 188 aaPredicted RBP16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SRLQ86TD4 932 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 SMARCAD1Q9H4L7 1026 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
PTPN11-201ENST00000351677 FAM205AQ6ZU69 1335 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 UBA6A0AVT1 1052 aaPredicted RBP16.86■□□□□ 0.29
PTPN11-201ENST00000351677 C19orf81C9J6K1 198 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 GTF2H1P32780 548 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 RAD23BP54727 409 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 TPI1P60174 286 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 KYNUQ16719 465 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 ATG4CQ96DT6 458 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 DNAJC7Q99615 494 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 PLAGL2Q9UPG8 496 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 CFAP73A6NFT4 308 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 PON1P27169 355 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 NTRK3Q16288 839 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 TPCN2Q8NHX9 752 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 ISCUQ9H1K1 167 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 NPHS2Q9NP85 383 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 ARL2BPQ9Y2Y0 163 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 CDH16O75309 829 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 ALDH18A1P54886 795 aaKnown RBP16.86■□□□□ 0.29
PTPN11-201ENST00000351677 CDK17Q00537 523 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 NFIAQ12857 509 aa16.86■□□□□ 0.29
PTPN11-201ENST00000351677 ERP44Q9BS26 406 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms