RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 KLHL40Q2TBA0 621 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 CEP135Q66GS9 1140 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 DCLRE1AQ6PJP8 1040 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 FOXR2Q6PJQ5 311 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 DDX53Q86TM3 631 aaKnown RBP15.1■□□□□ 0.01
SEC13-202ENST00000350697 CACTINQ8WUQ7 758 aaKnown RBP15.1■□□□□ 0.01
SEC13-202ENST00000350697 POF1BQ8WVV4 589 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 NELFBQ8WX92 580 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 MYLIPQ8WY64 445 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 RABGGTAQ92696 567 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 TMEM63CQ9P1W3 806 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 ADAM28Q9UKQ2 775 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 CTNND2Q9UQB3 1225 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 PRRC2BQ5JSZ5 2229 aaKnown RBP15.1■□□□□ 0.01
SEC13-202ENST00000350697 TRIM49BA6NDI0 452 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 F8W810 466 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 TMEM189-UBE2V1I3L0A0 370 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 TADA2AO75478 443 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 B3GAT3O94766 335 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 KIF4AO95239 1232 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 DNAJB1P25685 340 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 NLRP12P59046 1061 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 TFAMQ00059 246 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 PAK1Q13153 545 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 MRPL38Q96DV4 380 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 FNBP1Q96RU3 617 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 AKAP3O75969 853 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 IGFBP4P22692 258 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 GUCY2FP51841 1108 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 ELAVL2Q12926 359 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 CAMK1Q14012 370 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 DPCR1Q3MIW9 517 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 PDE12Q6L8Q7 609 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 TTI2Q6NXR4 508 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 CAVIN1Q6NZI2 390 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 FUT10Q6P4F1 479 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 WDR49Q8IV35 697 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 ZC3H3Q8IXZ2 948 aaKnown RBP15.09■□□□□ 0.01
SEC13-202ENST00000350697 PARD3BQ8TEW8 1205 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 CGRRF1Q99675 332 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 MKNK1Q9BUB5 465 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 TLR9Q9NR96 1032 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 INTS13Q9NVM9 706 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 DPP3Q9NY33 737 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 DACH1Q9UI36 760 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 MTCH2Q9Y6C9 303 aa15.09■□□□□ 0.01
SEC13-202ENST00000350697 SF3B1O75533 1304 aaKnown RBP eCLIP15.08■□□□□ 0.014e-7■■■■■ 63.1
SEC13-202ENST00000350697 EFEMP2O95967 443 aa15.08■□□□□ 0
SEC13-202ENST00000350697 SOD2P04179 222 aa15.08■□□□□ 0
SEC13-202ENST00000350697 TMEM191BP0C7N4 346 aa15.08■□□□□ 0
SEC13-202ENST00000350697 FOSL2P15408 326 aa15.08■□□□□ 0
SEC13-202ENST00000350697 TNNI1P19237 187 aa15.08■□□□□ 0
SEC13-202ENST00000350697 STX17P56962 302 aa15.08■□□□□ 0
SEC13-202ENST00000350697 BMS1Q14692 1282 aaKnown RBP15.08■□□□□ 0
SEC13-202ENST00000350697 DUOXA2Q1HG44 320 aa15.08■□□□□ 0
SEC13-202ENST00000350697 LMBRD2Q68DH5 695 aaPredicted RBP15.08■□□□□ 0
SEC13-202ENST00000350697 SASS6Q6UVJ0 657 aa15.08■□□□□ 0
SEC13-202ENST00000350697 INTS8Q75QN2 995 aaKnown RBP15.08■□□□□ 0
SEC13-202ENST00000350697 USP37Q86T82 979 aa15.08■□□□□ 0
SEC13-202ENST00000350697 FAM186BQ8IYM0 893 aa15.08■□□□□ 0
SEC13-202ENST00000350697 RNF168Q8IYW5 571 aaPredicted RBP15.08■□□□□ 0
SEC13-202ENST00000350697 VPS52Q8N1B4 723 aa15.08■□□□□ 0
SEC13-202ENST00000350697 C3orf58Q8NDZ4 430 aa15.08■□□□□ 0
SEC13-202ENST00000350697 TMC2Q8TDI7 906 aa15.08■□□□□ 0
SEC13-202ENST00000350697 HASPINQ8TF76 798 aa15.08■□□□□ 0
SEC13-202ENST00000350697 EEF2KMTQ96G04 330 aa15.08■□□□□ 0
SEC13-202ENST00000350697 ANKRD36BP1Q96IX9 119 aa15.08■□□□□ 0
SEC13-202ENST00000350697 DUSP9Q99956 384 aaKnown RBP15.08■□□□□ 0
SEC13-202ENST00000350697 VN1R3Q9BXE9 311 aa15.08■□□□□ 0
SEC13-202ENST00000350697 ZBP1Q9H171 429 aa15.08■□□□□ 0
SEC13-202ENST00000350697 NGRNQ9NPE2 291 aaKnown RBP15.08■□□□□ 0
SEC13-202ENST00000350697 RWDD2AQ9UIY3 292 aa15.08■□□□□ 0
SEC13-202ENST00000350697 ANO9A1A5B4 782 aa15.07■□□□□ 0
SEC13-202ENST00000350697 SLC16A3O15427 465 aaKnown RBP15.07■□□□□ 0
SEC13-202ENST00000350697 TRAPPC3O43617 180 aa15.07■□□□□ 0
SEC13-202ENST00000350697 TNNC2P02585 160 aa15.07■□□□□ 0
SEC13-202ENST00000350697 EPB41P11171 864 aaKnown RBP15.07■□□□□ 0
SEC13-202ENST00000350697 KRT13P13646 458 aa15.07■□□□□ 0
SEC13-202ENST00000350697 ERVFC1P60507 584 aa15.07■□□□□ 0
SEC13-202ENST00000350697 ENPEPQ07075 957 aa15.07■□□□□ 0
SEC13-202ENST00000350697 TIGD5Q53EQ6 642 aa15.07■□□□□ 0
SEC13-202ENST00000350697 CT47A1Q5JQC4 288 aaPredicted RBP15.07■□□□□ 0
SEC13-202ENST00000350697 C9orf57Q5W0N0 161 aa15.07■□□□□ 0
SEC13-202ENST00000350697 CD300LGQ6UXG3 332 aa15.07■□□□□ 0
SEC13-202ENST00000350697 TMC7Q7Z402 723 aa15.07■□□□□ 0
SEC13-202ENST00000350697 TMEM130Q8N3G9 435 aa15.07■□□□□ 0
SEC13-202ENST00000350697 PLEKHO2Q8TD55 490 aa15.07■□□□□ 0
SEC13-202ENST00000350697 MICAL1Q8TDZ2 1067 aa15.07■□□□□ 0
SEC13-202ENST00000350697 CEP63Q96MT8 703 aa15.07■□□□□ 0
SEC13-202ENST00000350697 POP1Q99575 1024 aaKnown RBP15.07■□□□□ 0
SEC13-202ENST00000350697 TCF25Q9BQ70 676 aa15.07■□□□□ 0
SEC13-202ENST00000350697 HERC2P3Q9BVR0 1158 aa15.07■□□□□ 0
SEC13-202ENST00000350697 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
SEC13-202ENST00000350697 MTMR12Q9C0I1 747 aa15.07■□□□□ 0
SEC13-202ENST00000350697 GZF1Q9H116 711 aaPredicted RBP15.07■□□□□ 0
SEC13-202ENST00000350697 ENTPD7Q9NQZ7 604 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms