RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DR1Q01658 176 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 ALCAMQ13740 583 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 HDDC2Q7Z4H3 204 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 GPR141Q7Z602 305 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 UBE2OQ9C0C9 1292 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 POLR3FQ9H1D9 316 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 DDX18Q9NVP1 670 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 GGA2Q9UJY4 613 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 BAIAP3O94812 1187 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 SOX5P35711 763 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 PHKA2P46019 1235 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 PEX5P50542 639 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 MTMR2Q13614 643 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 TEDDM1Q5T9Z0 273 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 YTHDF3Q7Z739 585 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 HIPK4Q8NE63 616 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 MYCBPAPQ8TBZ2 947 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 TRPV6Q9H1D0 765 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 ANAPC7Q9UJX3 599 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 TBC1D12O60347 775 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PLS3P13797 630 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 ADRA2BP18089 450 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PGM1P36871 562 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 CCZ1BP86790 482 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 CCZ1P86791 482 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 SMAD1Q15797 465 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 FUKQ8N0W3 1084 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 SLC26A7Q8TE54 656 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 LRRC39Q96DD0 335 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 FBXO40Q9UH90 709 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 AP4S1Q9Y587 144 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 NOTOA8MTQ0 251 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 SRGAP2O75044 1071 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PGM3O95394 542 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 NFKBIAP25963 317 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 ELF3P78545 371 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 GFPT1Q06210 699 aaPredicted RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 ARL13BQ3SXY8 428 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 AGBL2Q5U5Z8 902 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PPP4R3CPQ6ZMV5 832 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 C11orf74Q86VG3 221 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PBKQ96KB5 322 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 SH2D3AQ9BRG2 576 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 LXNQ9BS40 222 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 CRB1P82279 1406 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 NPHP3-ACAD11A0A0J9YXS1 232 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 STK25O00506 426 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 FGGP02679 453 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 MT-ND3P03897 115 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 DAB2P98082 770 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 FAPQ12884 760 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PDAP1Q13442 181 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 TTLL4Q14679 1199 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 BTNL9Q6UXG8 535 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 THEM5Q8N1Q8 247 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PLGRKTQ9HBL7 147 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 ADAM22Q9P0K1 906 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 BAG5Q9UL15 447 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 IPPQ9Y573 584 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 MFAP3LO75121 409 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PALMO75781 387 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 ACSL3O95573 720 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 HSPA13P48723 471 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 SH2D3CQ8N5H7 860 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 PDCD6IPQ8WUM4 868 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 NOL6Q9H6R4 1146 aaKnown RBP11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 TBC1D22BQ9NU19 505 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 BARHL2Q9NY43 387 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 GGT7Q9UJ14 662 aa11.67□□□□□ -0.54
SMARCE1-202ENST00000348513 FCER1AP12319 257 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 TRIM25Q14258 630 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 ZNF746Q6NUN9 644 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 XXYLT1Q8NBI6 393 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 XPO6Q96QU8 1125 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 LRRC53A6NM62 1247 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 HSPA8P11142 646 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 PMLP29590 882 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 SPARCL1Q14515 664 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 FAF2Q96CS3 445 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 SMYD3Q9H7B4 428 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 OLA1Q9NTK5 396 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 CNOT8Q9UFF9 292 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 ZNF232Q9UNY5 417 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 TELO2Q9Y4R8 837 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 HEY1Q9Y5J3 304 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 EXOC1LA0A1B0GW35 172 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 ARHGEF37A1IGU5 675 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms