RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SERINC5Q86VE9 423 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 NT5DC4Q86YG4 428 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 GLYCTKQ8IVS8 523 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 RNF10Q8N5U6 811 aaKnown RBP23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 OLIG1Q8TAK6 271 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 L2HGDHQ9H9P8 463 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 INTUQ9ULD6 942 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 TRPV2Q9Y5S1 764 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 CLSTN1O94985 981 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 SGPL1O95470 568 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 NFICP08651 508 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 KRT5P13647 590 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 JADE1Q6IE81 842 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 RPAINQ86UA6 219 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 EPS8L1Q8TE68 723 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 DHX38Q92620 1227 aaKnown RBP23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 NAPGQ99747 312 aaPredicted RBP23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 HMX1Q9NP08 348 aaPredicted RBP23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 NUB1Q9Y5A7 615 aa23.07■■□□□ 1.28
TSPAN3-202ENST00000346495 BTNL10A8MVZ5 291 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 MEFVO15553 781 aaPredicted RBP23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 TACC1O75410 805 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 PDE6CP51160 858 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 MYL6P60660 151 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 SMYD5Q6GMV2 418 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 TRIM58Q8NG06 486 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 TAF4BQ92750 862 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 PLEKHA5Q9HAU0 1116 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 NOCTQ9UK39 431 aaKnown RBP23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 PIN4Q9Y237 131 aaKnown RBP23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 CDY2AQ9Y6F7 541 aa23.06■■□□□ 1.28
TSPAN3-202ENST00000346495 H2AFZP0C0S5 128 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 GRK4P32298 578 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 BPIFB4P59827 614 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 PTPN11Q06124 597 aaPredicted RBP23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 TMEM132DQ14C87 1099 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 H2AFVQ71UI9 128 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 RPUSD2Q8IZ73 545 aaKnown RBP23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 SLC20A1Q8WUM9 679 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 ARID3AQ99856 593 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 TRIM6Q9C030 488 aaPredicted RBP23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 SEPT11Q9NVA2 429 aaKnown RBP23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 C2CD2Q9Y426 696 aa23.05■■□□□ 1.28
TSPAN3-202ENST00000346495 FRMPD3Q5JV73 1810 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 MOXD2PA6NHM9 499 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 CYP11B1P15538 503 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 ACLYP53396 1101 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 YARSP54577 528 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 NOP9Q86U38 636 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 SLC47A2Q86VL8 602 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 NOX5Q96PH1 765 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 ALS2CR12Q96Q35 445 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 TSEN34Q9BSV6 310 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 PACSIN1Q9BY11 444 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 EIF2AQ9BY44 585 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 DERAQ9Y315 318 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 GRIN2DO15399 1336 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 ACO1P21399 889 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 ITGA7Q13683 1181 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 TUBB2AQ13885 445 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 PTGISQ16647 500 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 ZNF699Q32M78 642 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 C1orf127Q8N9H9 656 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 TUBB2BQ9BVA1 445 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 NIF3L1Q9GZT8 377 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 SNTG2Q9NY99 539 aa23.04■■□□□ 1.28
TSPAN3-202ENST00000346495 MOCS3O95396 460 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 CDR2Q01850 454 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 SCARA3Q6AZY7 606 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 FAM228AQ86W67 206 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 FAXDC2Q96IV6 333 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 CNTN6Q9UQ52 1028 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 NOC2LQ9Y3T9 749 aaKnown RBP23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 PCDHB4Q9Y5E5 795 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 UMODL1Q5DID0 1318 aa23.03■■□□□ 1.28
TSPAN3-202ENST00000346495 KRT19P08727 400 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 CHRNB2P17787 502 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 LHX8Q68G74 356 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 ZNF677Q86XU0 584 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 WNT8BQ93098 351 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 SNX27Q96L92 541 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 XYLT2Q9H1B5 865 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 SIX4Q9UIU6 781 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 SALL4Q9UJQ4 1053 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 ITGA11Q9UKX5 1188 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 TRIM17Q9Y577 477 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 PCDHB2Q9Y5E7 798 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 PTCH2Q9Y6C5 1203 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 CAPN6Q9Y6Q1 641 aa23.02■■□□□ 1.28
TSPAN3-202ENST00000346495 UQCRHLA0A096LP55 91 aa23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 ANO9A1A5B4 782 aa23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 UQCRHP07919 91 aa23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 ATICP31939 592 aa23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 GTF2F1P35269 517 aaKnown RBP eCLIP23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 GALCP54803 685 aa23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 NAP1L1P55209 391 aaKnown RBP23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 MGAT3Q09327 533 aa23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 IFI16Q16666 785 aaKnown RBP23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 TAF3Q5VWG9 929 aa23.01■■□□□ 1.27
TSPAN3-202ENST00000346495 KIF12Q96FN5 646 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms