RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 KIAA0753Q2KHM9 967 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 TEX35Q5T0J7 233 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 IER5Q5VY09 327 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 PAPD7Q5XG87 772 aaKnown RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 LMBRD2Q68DH5 695 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 KRT39Q6A163 491 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 RSRC2Q7L4I2 434 aaKnown RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 SRGAP1Q7Z6B7 1085 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 TRIM58Q8NG06 486 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 TAS1R2Q8TE23 839 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 PSPC1Q8WXF1 523 aaKnown RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 KCNN1Q92952 543 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 MRRFQ96E11 262 aaKnown RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 SMARCAD1Q9H4L7 1026 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 TMEM8AQ9HCN3 771 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 VTA1Q9NP79 307 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 CPA4Q9UI42 421 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 NAGPAQ9UK23 515 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 AGO2Q9UKV8 859 aaKnown RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 NENFQ9UMX5 172 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 STYXL1Q9Y6J8 313 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF233A6NK53 670 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 PIGRP01833 764 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 LGALS2P05162 132 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 MPSTP25325 297 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 ABCD1P33897 745 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 NAP1L1P55209 391 aaKnown RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 LAMC2Q13753 1193 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 TUBB2AQ13885 445 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 NAB2Q15742 525 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 FAM110CQ1W6H9 321 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 ALKBH5Q6P6C2 394 aaKnown RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CRELD2Q6UXH1 353 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 PLEKHH3Q7Z736 793 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 PDCL2Q8N4E4 241 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 RNF149Q8NC42 400 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 NPLOC4Q8TAT6 608 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 U2AF1L4Q8WU68 220 aaKnown RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 AFG1LQ8WV93 481 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 VTI1AQ96AJ9 217 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 MAML3Q96JK9 1138 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 KREMEN1Q96MU8 473 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 SYT11Q9BT88 431 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 TUBB2BQ9BVA1 445 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CALCOCO1Q9P1Z2 691 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 KIAA1522Q9P206 1035 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 SAR1BQ9Y6B6 198 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 IGF2BP3O00425 579 aaKnown RBP eCLIP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF185O15231 689 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 NCK2O43639 380 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 GH1P01241 217 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF286BP0CG31 522 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 HARSP12081 509 aaKnown RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CLCN3P51790 818 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CHMP4BP1P59074 171 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 IGBP1P78318 339 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 FOXC1Q12948 553 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 WHAMMP3Q1A5X7 153 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 SEZ6Q53EL9 994 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 SH3PXD2AQ5TCZ1 1133 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 FBXO38Q6PIJ6 1188 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 SV2AQ7L0J3 742 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CYP2U1Q7Z449 544 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 RASAL3Q86YV0 1011 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 RHPN2Q8IUC4 686 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 TXLNBQ8N3L3 684 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 METTL13Q8N6R0 699 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CEP112Q8N8E3 955 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 SLC30A5Q8TAD4 765 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CAPZA3Q96KX2 299 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 NOX5Q96PH1 765 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 MSTO1Q9BUK6 570 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 CCDC113Q9H0I3 377 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 LUC7LQ9NQ29 371 aaKnown RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 ERAP1Q9NZ08 941 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 SUCLA2Q9P2R7 463 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-202ENST00000345734 COQ4Q9Y3A0 265 aa9.95□□□□□ -0.82
ATG4A-202ENST00000345734 MGAMO43451 1857 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 PTPRJQ12913 1337 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 A0A0B4J269 797 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ANO9A1A5B4 782 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 TMCO5BA8MYB1 307 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 HBP1O60381 514 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 MSCO60682 206 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SMPD1P17405 629 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ANXA13P27216 316 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 GTF2H1P32780 548 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 USP8P40818 1118 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SLC19A1P41440 591 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 SLC26A2P50443 739 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 GPC3P51654 580 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF157P51786 506 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-202ENST00000345734 BMS1Q14692 1282 aaKnown RBP9.94□□□□□ -0.82
ATG4A-202ENST00000345734 KIF22Q14807 665 aa9.94□□□□□ -0.82
ATG4A-202ENST00000345734 CDCA2Q69YH5 1023 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms