RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 FSD1LQ9BXM9 530 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 KIF17Q9P2E2 1029 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 CPSF3Q9UKF6 684 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 F5H423 210 aaPredicted RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 M0QYV0 167 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 PMS1P54277 932 aaKnown RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 TBX2Q13207 712 aaPredicted RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 PREPLQ4J6C6 727 aaPredicted RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 YTHDF3Q7Z739 585 aaKnown RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 SYNE4Q8N205 404 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 OR6B3Q8NGW1 331 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 NEDD1Q8NHV4 660 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 CDC26Q8NHZ8 85 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 PPP1R36Q96LQ0 422 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 CDC42BPBQ9Y5S2 1711 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 LOC100653049A0A140TA62 436 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 SLC26A4O43511 780 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 ATP9AO75110 1047 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 KRT34O76011 436 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 NLRP11P59045 1033 aaKnown RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 ZNF507Q8TCN5 953 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 REEP2Q9BRK0 252 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 C20orf96Q9NUD7 363 aaPredicted RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 ATP11BQ9Y2G3 1177 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 APOL1O14791 398 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 ANGPT2O15123 496 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 SNX2O60749 519 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 FAM102AQ5T9C2 384 aaPredicted RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 CYGBQ8WWM9 190 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 ZSWIM1Q9BR11 485 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 CAAP1Q9H8G2 361 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 MRGBPQ9NV56 204 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 PPEF1O14829 653 aaPredicted RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 NPR1P16066 1061 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 SMAD1Q15797 465 aaKnown RBP18.36■□□□□ 0.53
SPAST-202ENST00000345662 WASHC2DQ5SRD0 308 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 CNBD2Q96M20 576 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 TUFT1Q9NNX1 390 aa18.36■□□□□ 0.53
SPAST-202ENST00000345662 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 F8VZ95 297 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 KCNN4O15554 427 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 APRTP07741 180 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 CALB2P22676 271 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 TTC39BQ5VTQ0 682 aaPredicted RBP18.35■□□□□ 0.53
SPAST-202ENST00000345662 SCUBE1Q8IWY4 988 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 FBXO25Q8TCJ0 367 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 CPA5Q8WXQ8 436 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 MIEF2Q96C03 454 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 RAB6BQ9NRW1 208 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 MEI1Q5TIA1 1274 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 C18orf8Q96DM3 657 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 ATXN7L3BQ96GX2 97 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 AIPL1Q9NZN9 384 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 KRT76Q01546 638 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 TRADDQ15628 312 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 CHI3L2Q15782 390 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 ITPRIPL1Q6GPH6 555 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 RWDD4Q6NW29 188 aaKnown RBP18.35■□□□□ 0.53
SPAST-202ENST00000345662 ARHGAP22Q7Z5H3 698 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 ZNF555Q8NEP9 628 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 BEGAINQ9BUH8 593 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 ASPSCR1Q9BZE9 553 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 UNC45AQ9H3U1 944 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 GRID1Q9ULK0 1009 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 LRCH1Q9Y2L9 728 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 CLRN2A0PK11 232 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 CYP27B1O15528 508 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 MTRQ99707 1265 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 GLI2P10070 1586 aa18.35■□□□□ 0.53
SPAST-202ENST00000345662 TRIM16LQ309B1 348 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 MFN1Q8IWA4 741 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 RBBP8NLQ8NC74 664 aaPredicted RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 PIGBQ92521 554 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 FAM118BQ9BPY3 351 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 MINPP1Q9UNW1 487 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 TMCC1O94876 653 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 HSPA1AP0DMV8 641 aaKnown RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 HSPA1BP0DMV9 641 aaKnown RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 SERPINB1P30740 379 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 ATXN3P54252 364 aaPredicted RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 CDY1Q9Y6F8 540 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 NPEPPSP55786 919 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 TTI2Q6NXR4 508 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 IZUMO2Q6UXV1 221 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 PODNQ7Z5L7 613 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 PLD3Q8IV08 490 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 DDIASQ8IXT1 998 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 MSL3Q8N5Y2 521 aaKnown RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 B4GALNT2Q8NHY0 566 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 MKNK1Q9BUB5 465 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 DHX35Q9H5Z1 703 aaKnown RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 HSPBP1Q9NZL4 362 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 BCS1LQ9Y276 419 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 SESN2P58004 480 aaPredicted RBP18.34■□□□□ 0.53
SPAST-202ENST00000345662 EPHA7Q15375 998 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms