RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KLHL23Q8NBE8 558 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 TATDN2Q93075 761 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 CDC42EP4Q9H3Q1 356 aaKnown RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 COG4Q9H9E3 785 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 ITGB1BP2Q9UKP3 347 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF804BA4D1E1 1349 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 SNRPAP09012 282 aaKnown RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 PAMP19021 973 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 HMOX2P30519 316 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 SCNN1DP51172 638 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 RASA2Q15283 850 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 C1orf228Q6PIY5 440 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 LRRC6Q86X45 466 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM120AQ9BXJ8 343 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 ARHGEF37A1IGU5 675 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF839A8K0R7 811 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 SRP72O76094 671 aaKnown RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 PMLP29590 882 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 STAT3P40763 770 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 FNTAP49354 379 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 CDK17Q00537 523 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 INAQ16352 499 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 SLC25A41Q8N5S1 370 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 NRBP2Q9NSY0 501 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 UBE4BO95155 1302 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 FAM58BPP0C7Q3 252 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 MECOMQ03112 1051 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 CDKAL1Q5VV42 579 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 DDIASQ8IXT1 998 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 CNDP1Q96KN2 507 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 BTBD10Q9BSF8 475 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 MSTO1Q9BUK6 570 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 PACSIN1Q9BY11 444 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM117Q9H0C3 514 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 MYLK2Q9H1R3 596 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 PARVAQ9NVD7 372 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 TAGLN3Q9UI15 199 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 DAPK2Q9UIK4 370 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 FNDC3AQ9Y2H6 1198 aaKnown RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.37
COL12A1-202ENST00000345356 SSTR3P32745 418 aaPredicted RBP12.71□□□□□ -0.37
COL12A1-202ENST00000345356 ANTXR2P58335 489 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 KCNJ2P63252 427 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 IFNEQ86WN2 208 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 SLC13A5Q86YT5 568 aaPredicted RBP12.71□□□□□ -0.37
COL12A1-202ENST00000345356 MICU2Q8IYU8 434 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 TTC8Q8TAM2 541 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 IGDCC4Q8TDY8 1250 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 CCDC17Q96LX7 622 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 SENP7Q9BQF6 1050 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 TBX22Q9Y458 520 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 MYO3BQ8WXR4 1341 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 MYMKA6NI61 221 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 TPD52L2O43399 206 aaKnown RBP12.71□□□□□ -0.37
COL12A1-202ENST00000345356 ABCB5Q2M3G0 1257 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 ANGPTL8Q6UXH0 198 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 TMC3Q7Z5M5 1100 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 FLCNQ8NFG4 579 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 ORAI2Q96SN7 254 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 SYBUQ9NX95 663 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
COL12A1-202ENST00000345356 OSTNP61366 133 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 SRBD1Q8N5C6 995 aaKnown RBP12.71□□□□□ -0.37
COL12A1-202ENST00000345356 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
COL12A1-202ENST00000345356 OMA1Q96E52 524 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 DCUN1D5Q9BTE7 237 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 GDF3Q9NR23 364 aa12.71□□□□□ -0.37
COL12A1-202ENST00000345356 ATP7AQ04656 1500 aa12.71□□□□□ -0.38
COL12A1-202ENST00000345356 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.38
COL12A1-202ENST00000345356 A8MXQ7 604 aa12.71□□□□□ -0.38
COL12A1-202ENST00000345356 IFI35P80217 286 aaPredicted RBP12.71□□□□□ -0.38
COL12A1-202ENST00000345356 SFSWAPQ12872 951 aaKnown RBP12.71□□□□□ -0.38
COL12A1-202ENST00000345356 TSTA3Q13630 321 aaPredicted RBP12.71□□□□□ -0.38
COL12A1-202ENST00000345356 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.38
COL12A1-202ENST00000345356 RNF135Q8IUD6 432 aa12.71□□□□□ -0.38
COL12A1-202ENST00000345356 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.38
COL12A1-202ENST00000345356 DHX36Q9H2U1 1008 aaKnown RBP12.71□□□□□ -0.38
COL12A1-202ENST00000345356 USP17L5A8MUK1 530 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 HNRNPCL2B2RXH8 293 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CBX6O95503 412 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 AKR1B1P15121 316 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 CDK8P49336 464 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 GDPD5Q8WTR4 605 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 NAGPAQ9UK23 515 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 ABCD1P33897 745 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 SERPINB9P50453 376 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 PEX5P50542 639 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 GRM4Q14833 912 aa12.7□□□□□ -0.38
COL12A1-202ENST00000345356 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms