RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TADA2AO75478 443 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 FGF18O76093 207 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 DDHD2O94830 711 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 CYP3A5P20815 502 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 PAX3P23760 479 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 CCNE1P24864 410 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 PLCB3Q01970 1234 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 PAK1Q13153 545 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 GLRA4Q5JXX5 417 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 CEP135Q66GS9 1140 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 PDE12Q6L8Q7 609 aaKnown RBP12.83□□□□□ -0.36
SNCA-202ENST00000345009 DCLRE1AQ6PJP8 1040 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 FOXR2Q6PJQ5 311 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 CRELD2Q6UXH1 353 aaPredicted RBP12.83□□□□□ -0.36
SNCA-202ENST00000345009 KLHL23Q8NBE8 558 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 RDH13Q8NBN7 331 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
SNCA-202ENST00000345009 DMAC2Q9NW81 257 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 LMCD1Q9NZU5 365 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 PLAGL2Q9UPG8 496 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 LZTS1Q9Y250 596 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 CITO14578 2027 aa12.83□□□□□ -0.36
SNCA-202ENST00000345009 PTPRSQ13332 1948 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 NRP1O14786 923 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 LPXNO60711 386 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 B3GAT3O94766 335 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 KRT13P13646 458 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 SLC11A1P49279 550 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 AP3M2P53677 418 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 NLRP12P59046 1061 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 ELAVL2Q12926 359 aaKnown RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 GRIN2CQ14957 1233 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 DUOXA2Q1HG44 320 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 JADE1Q6IE81 842 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 INTS8Q75QN2 995 aaKnown RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 CBWD2Q8IUF1 395 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 SLC39A11Q8N1S5 342 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 KCNV2Q8TDN2 545 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 NELFBQ8WX92 580 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 PPP2R3CQ969Q6 453 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 IGSF21Q96ID5 467 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 ANKRD36BP1Q96IX9 119 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 FAM161BQ96MY7 647 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 MKNK1Q9BUB5 465 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 DNAJB4Q9UDY4 337 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 PRG3Q9Y2Y8 225 aaPredicted RBP12.82□□□□□ -0.36
SNCA-202ENST00000345009 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 TRANK1O15050 2925 aa12.82□□□□□ -0.36
SNCA-202ENST00000345009 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 TNNC2P02585 160 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 TMEM191BP0C7N4 346 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 LINC00271P0C7V0 271 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 DLATP10515 647 aaKnown RBP12.81□□□□□ -0.36
SNCA-202ENST00000345009 TNNI1P19237 187 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ENPEPQ07075 957 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 CYP24A1Q07973 514 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 PSMD6Q15008 389 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ZBTB6Q15916 424 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 TPD52L1Q16890 204 aaPredicted RBP12.81□□□□□ -0.36
SNCA-202ENST00000345009 SPATA1Q5VX52 437 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 KIAA1841Q6NSI8 718 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 RBM43Q6ZSC3 357 aaKnown RBP12.81□□□□□ -0.36
SNCA-202ENST00000345009 DDX53Q86TM3 631 aaKnown RBP12.81□□□□□ -0.36
SNCA-202ENST00000345009 WDR49Q8IV35 697 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 CCDC127Q96BQ5 260 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 MFSD14AQ96MC6 490 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ADAM33Q9BZ11 813 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 PRDM12Q9H4Q4 367 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 PDE11AQ9HCR9 933 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ALG13Q9NP73 1137 aaKnown RBP12.81□□□□□ -0.36
SNCA-202ENST00000345009 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
SNCA-202ENST00000345009 ANO10Q9NW15 660 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ADAM28Q9UKQ2 775 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 NUB1Q9Y5A7 615 aa12.81□□□□□ -0.36
SNCA-202ENST00000345009 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 NT5C1B-RDH14C9J2C7 533 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 PODXLO00592 558 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 IKBKBO14920 756 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 SLC16A3O15427 465 aaKnown RBP12.8□□□□□ -0.36
SNCA-202ENST00000345009 STX10O60499 249 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 GNA14O95837 355 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 ITGB1P05556 798 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 BMP6P22004 513 aa12.8□□□□□ -0.36
SNCA-202ENST00000345009 IGFBP4P22692 258 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms