RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 VN1R2Q8NFZ6 395 aa15□□□□□ -0.01
TPM4-202ENST00000344824 FAM200AQ8TCP9 573 aa15□□□□□ -0.01
TPM4-202ENST00000344824 B3GALT6Q96L58 329 aa15□□□□□ -0.01
TPM4-202ENST00000344824 FIZ1Q96SL8 496 aa15□□□□□ -0.01
TPM4-202ENST00000344824 GTPBP4Q9BZE4 634 aaKnown RBP15□□□□□ -0.01
TPM4-202ENST00000344824 OLFML3Q9NRN5 406 aa15□□□□□ -0.01
TPM4-202ENST00000344824 MRPL17Q9NRX2 175 aaKnown RBP15□□□□□ -0.01
TPM4-202ENST00000344824 FAM50BQ9Y247 325 aa15□□□□□ -0.01
TPM4-202ENST00000344824 TRIM49BA6NDI0 452 aa15□□□□□ -0.01
TPM4-202ENST00000344824 GOLGA6L3A6NEY3 463 aa15□□□□□ -0.01
TPM4-202ENST00000344824 BECN2A8MW95 431 aa15□□□□□ -0.01
TPM4-202ENST00000344824 ABLIM1O14639 778 aa15□□□□□ -0.01
TPM4-202ENST00000344824 PSMA7O14818 248 aa15□□□□□ -0.01
TPM4-202ENST00000344824 CLASP2O75122 1294 aaKnown RBP15□□□□□ -0.01
TPM4-202ENST00000344824 TADA2AO75478 443 aa15□□□□□ -0.01
TPM4-202ENST00000344824 KIF4AO95239 1232 aa15□□□□□ -0.01
TPM4-202ENST00000344824 CXCL8P10145 99 aa15□□□□□ -0.01
TPM4-202ENST00000344824 SSTR3P32745 418 aaPredicted RBP15□□□□□ -0.01
TPM4-202ENST00000344824 PAK1Q13153 545 aa15□□□□□ -0.01
TPM4-202ENST00000344824 COL19A1Q14993 1142 aa15□□□□□ -0.01
TPM4-202ENST00000344824 MRPL43Q8N983 215 aaKnown RBP15□□□□□ -0.01
TPM4-202ENST00000344824 SCFD1Q8WVM8 642 aa15□□□□□ -0.01
TPM4-202ENST00000344824 SNX27Q96L92 541 aa15□□□□□ -0.01
TPM4-202ENST00000344824 CLEC1BQ9P126 229 aa15□□□□□ -0.01
TPM4-202ENST00000344824 STK39Q9UEW8 545 aa15□□□□□ -0.01
TPM4-202ENST00000344824 HCFC2Q9Y5Z7 792 aa15□□□□□ -0.01
TPM4-202ENST00000344824 C2orf16Q68DN1 1984 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 SF3B1O75533 1304 aaKnown RBP eCLIP14.99□□□□□ -0.016e-7■■■■■ 83
TPM4-202ENST00000344824 MBTPS2O43462 519 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 KLRC2P26717 231 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 TNFSF9P41273 254 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 SMAD4Q13485 552 aaKnown RBP14.99□□□□□ -0.01
TPM4-202ENST00000344824 PUS10Q3MIT2 529 aaKnown RBP14.99□□□□□ -0.01
TPM4-202ENST00000344824 STXBP4Q6ZWJ1 553 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 TAS1R1Q7RTX1 841 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 ZNF720Q7Z2F6 126 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 CEP57Q86XR8 500 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 MAP4K3Q8IVH8 894 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 DHX40Q8IX18 779 aaKnown RBP14.99□□□□□ -0.01
TPM4-202ENST00000344824 GUF1Q8N442 669 aaKnown RBP14.99□□□□□ -0.01
TPM4-202ENST00000344824 NOC3LQ8WTT2 800 aaKnown RBP14.99□□□□□ -0.01
TPM4-202ENST00000344824 CASP10Q92851 521 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 FAM212AQ96EL1 285 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 MSTO1Q9BUK6 570 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 EMILIN2Q9BXX0 1053 aa14.99□□□□□ -0.01
TPM4-202ENST00000344824 SMIM28A0A1B0GU29 152 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 GRXCR2A6NFK2 248 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 TISP43B9A030 160 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 EIF3DO15371 548 aaKnown RBP eCLIP14.98□□□□□ -0.01
TPM4-202ENST00000344824 KIF20AO95235 890 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 CAVIN2O95810 425 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 EPCAMP16422 314 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 ABCD1P33897 745 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 PPP1R2P41236 205 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 CLCNKBP51801 687 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
TPM4-202ENST00000344824 GTF2BQ00403 316 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 SPAG1Q07617 926 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 MCL1Q07820 350 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 KCNA1Q09470 495 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 IQCB1Q15051 598 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 TPD52L1Q16890 204 aaPredicted RBP14.98□□□□□ -0.01
TPM4-202ENST00000344824 USP41Q3LFD5 358 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 COBLL1Q53SF7 1204 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 EPM2AIP1Q7L775 607 aaPredicted RBP14.98□□□□□ -0.01
TPM4-202ENST00000344824 RIN2Q8WYP3 895 aaPredicted RBP14.98□□□□□ -0.01
TPM4-202ENST00000344824 DHTKD1Q96HY7 919 aaPredicted RBP14.98□□□□□ -0.01
TPM4-202ENST00000344824 PPP1R10Q96QC0 940 aaKnown RBP14.98□□□□□ -0.01
TPM4-202ENST00000344824 BPIFA3Q9BQP9 254 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 GPR62Q9BZJ7 368 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 HAPLN2Q9GZV7 340 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 IKZF4Q9H2S9 585 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 RWDD2AQ9UIY3 292 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 PCDHB13Q9Y5F0 798 aa14.98□□□□□ -0.01
TPM4-202ENST00000344824 GOLGA6L19H0YKK7 550 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 TNFRSF10AO00220 468 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 SCP2P22307 547 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 CCNE1P24864 410 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 ERCC5P28715 1186 aaPredicted RBP14.97□□□□□ -0.01
TPM4-202ENST00000344824 MYL5Q02045 173 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 PPP2R3AQ06190 1150 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 SOX4Q06945 474 aaPredicted RBP14.97□□□□□ -0.01
TPM4-202ENST00000344824 NAB2Q15742 525 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 HSP90AA4PQ58FG1 418 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 ANKRD54Q6NXT1 300 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 SYCP3Q8IZU3 236 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 MSLNLQ96KJ4 702 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 MED15Q96RN5 788 aa14.97□□□□□ -0.01
TPM4-202ENST00000344824 USP15Q9Y4E8 981 aaPredicted RBP14.97□□□□□ -0.01
TPM4-202ENST00000344824 UBE4BO95155 1302 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 SMTNL1A8MU46 457 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 ANKRD63C9JTQ0 380 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 PODXLO00592 558 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 OGTO15294 1046 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 PPP1R37O75864 691 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 B3GAT3O94766 335 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 PIGRP01833 764 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 CNPP09543 421 aaKnown RBP14.96□□□□□ -0.01
TPM4-202ENST00000344824 RPL17P18621 184 aaKnown RBP14.96□□□□□ -0.01
TPM4-202ENST00000344824 HOXD13P35453 343 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms