RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SIX6OS1Q8N1H7 587 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 ZNF555Q8NEP9 628 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 C18orf8Q96DM3 657 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 CLMNQ96JQ2 1002 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 SENP2Q9HC62 589 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 TULP4Q9NRJ4 1543 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 AIM2O14862 343 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 ZNF189O75820 626 aaPredicted RBP19.01■□□□□ 0.63
SMC4-201ENST00000344722 CLPTM1O96005 669 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 FAM200BP0CF97 657 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 STK32AQ8WU08 396 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 FAM210AQ96ND0 272 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 TMEM117Q9H0C3 514 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 USP17L10C9JJH3 530 aa19■□□□□ 0.63
SMC4-201ENST00000344722 SERPINB1P30740 379 aa19■□□□□ 0.63
SMC4-201ENST00000344722 DOK7Q18PE1 504 aa19■□□□□ 0.63
SMC4-201ENST00000344722 GPR141Q7Z602 305 aa19■□□□□ 0.63
SMC4-201ENST00000344722 RPS6KC1Q96S38 1066 aa19■□□□□ 0.63
SMC4-201ENST00000344722 MTRQ99707 1265 aa19■□□□□ 0.63
SMC4-201ENST00000344722 PCMTD2Q9NV79 361 aa19■□□□□ 0.63
SMC4-201ENST00000344722 ARHGAP20Q9P2F6 1191 aa19■□□□□ 0.63
SMC4-201ENST00000344722 INPP5FQ9Y2H2 1132 aa19■□□□□ 0.63
SMC4-201ENST00000344722 DENND3A2RUS2 1198 aa19■□□□□ 0.63
SMC4-201ENST00000344722 H0YIN7 160 aa19■□□□□ 0.63
SMC4-201ENST00000344722 ATP4AP20648 1035 aa19■□□□□ 0.63
SMC4-201ENST00000344722 SDC4P31431 198 aa19■□□□□ 0.63
SMC4-201ENST00000344722 DAB2P98082 770 aa19■□□□□ 0.63
SMC4-201ENST00000344722 ZNF699Q32M78 642 aa19■□□□□ 0.63
SMC4-201ENST00000344722 CATSPER3Q86XQ3 398 aa19■□□□□ 0.63
SMC4-201ENST00000344722 EIF1ADQ8N9N8 165 aaKnown RBP19■□□□□ 0.63
SMC4-201ENST00000344722 AGR3Q8TD06 166 aa19■□□□□ 0.63
SMC4-201ENST00000344722 NMD3Q96D46 503 aaKnown RBP19■□□□□ 0.63
SMC4-201ENST00000344722 A8MXQ7 604 aa19■□□□□ 0.63
SMC4-201ENST00000344722 P4HBP07237 508 aaKnown RBP19■□□□□ 0.63
SMC4-201ENST00000344722 PMLP29590 882 aa19■□□□□ 0.63
SMC4-201ENST00000344722 NMT1P30419 496 aaKnown RBP19■□□□□ 0.63
SMC4-201ENST00000344722 TNFAIP1Q13829 316 aa19■□□□□ 0.63
SMC4-201ENST00000344722 GPD1LQ8N335 351 aa19■□□□□ 0.63
SMC4-201ENST00000344722 LARGE2Q8N3Y3 721 aa19■□□□□ 0.63
SMC4-201ENST00000344722 PPP2R3CQ969Q6 453 aa19■□□□□ 0.63
SMC4-201ENST00000344722 MKNK1Q9BUB5 465 aa19■□□□□ 0.63
SMC4-201ENST00000344722 BEGAINQ9BUH8 593 aa19■□□□□ 0.63
SMC4-201ENST00000344722 EHD4Q9H223 541 aa19■□□□□ 0.63
SMC4-201ENST00000344722 SARSP49591 514 aaKnown RBP19■□□□□ 0.63
SMC4-201ENST00000344722 OVGP1Q12889 678 aa19■□□□□ 0.63
SMC4-201ENST00000344722 CHI3L2Q15782 390 aa19■□□□□ 0.63
SMC4-201ENST00000344722 TRMT5Q32P41 509 aaKnown RBP19■□□□□ 0.63
SMC4-201ENST00000344722 TERB1Q8NA31 727 aa19■□□□□ 0.63
SMC4-201ENST00000344722 ZNF507Q8TCN5 953 aa19■□□□□ 0.63
SMC4-201ENST00000344722 HDAC7Q8WUI4 952 aa19■□□□□ 0.63
SMC4-201ENST00000344722 CENPTQ96BT3 561 aa19■□□□□ 0.63
SMC4-201ENST00000344722 DACH2Q96NX9 599 aa19■□□□□ 0.63
SMC4-201ENST00000344722 GRID1Q9ULK0 1009 aa19■□□□□ 0.63
SMC4-201ENST00000344722 IVNS1ABPQ9Y6Y0 642 aa19■□□□□ 0.63
SMC4-201ENST00000344722 TMC3Q7Z5M5 1100 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 SLC30A5Q8TAD4 765 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 CYGBQ8WWM9 190 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 KLF6Q99612 283 aaPredicted RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 SIKE1Q9BRV8 207 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 CAAP1Q9H8G2 361 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 CDY2AQ9Y6F7 541 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 CDY1Q9Y6F8 540 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 CNTNAP5Q8WYK1 1306 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 APOL1O14791 398 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 FAM153BP0C7A2 387 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 ALDH5A1P51649 535 aaPredicted RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 FAM153CQ494X1 144 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 SNX30Q5VWJ9 437 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 MTDHQ86UE4 582 aaKnown RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 ADGRF4Q8IZF3 695 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 JADE3Q92613 823 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 CDC42EP4Q9H3Q1 356 aaKnown RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 FAM153AQ9UHL3 310 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 ARID3BQ8IVW6 561 aaPredicted RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 FBXO25Q8TCJ0 367 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.99■□□□□ 0.632e-13■■■■■ 56.3
SMC4-201ENST00000344722 TRAPPC9Q96Q05 1148 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 TBC1D22BQ9NU19 505 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 CDH6P55285 790 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 ST3GAL1Q11201 340 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 FAM47CQ5HY64 1035 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 WLSQ5T9L3 541 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 TSEN2Q8NCE0 465 aaKnown RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 REEP2Q9BRK0 252 aa18.99■□□□□ 0.63
SMC4-201ENST00000344722 C20orf96Q9NUD7 363 aaPredicted RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 RNF17Q9BXT8 1623 aaKnown RBP18.99■□□□□ 0.63
SMC4-201ENST00000344722 PRDX5P30044 214 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 FXR2P51116 673 aaKnown RBP eCLIP18.98■□□□□ 0.632e-10■■■■■ 37.2
SMC4-201ENST00000344722 PPIL6Q8IXY8 311 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 OR9Q1Q8NGQ5 310 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 KIF17Q9P2E2 1029 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 MYO3BQ8WXR4 1341 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 SRP72O76094 671 aaKnown RBP18.98■□□□□ 0.63
SMC4-201ENST00000344722 POU5F1BQ06416 359 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 PDXDC2PQ6P474 469 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 C1orf228Q6PIY5 440 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 TMEM179Q6ZVK1 233 aa18.98■□□□□ 0.63
SMC4-201ENST00000344722 SKA2Q8WVK7 121 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms