RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 F13A1P00488 732 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 PPP3CCP48454 512 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 AARSP49588 968 aaKnown RBP eCLIP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 MARSP56192 900 aaKnown RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 PTGDRQ13258 359 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 IQCB1Q15051 598 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 FBXO43Q4G163 708 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 HHATQ5VTY9 493 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 LONP2Q86WA8 852 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 ZBTB10Q96DT7 871 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 FAM204AQ9H8W3 233 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 TET1Q8NFU7 2136 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 H7C4K7 107 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 XYLBO75191 536 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 NR1I2O75469 434 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 PYGLP06737 847 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 RAP1GAPP47736 663 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 ZNF165P49910 485 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 SMTNP53814 917 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 SLC14A1Q13336 389 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 TFDP1Q14186 410 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 KCTD1Q719H9 257 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 SPATA21Q7Z572 469 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 FAM228AQ86W67 206 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 CPXCR1Q8N123 301 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 CCDC150Q8NCX0 1101 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 GOLGA1Q92805 767 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 DHX33Q9H6R0 707 aaKnown RBP7.95□□□□□ -1.14
ZNF540-202ENST00000343599 TMEM134Q9H6X4 195 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 CDH7Q9ULB5 785 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 CAPN7Q9Y6W3 813 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 N4BP3O15049 544 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 RASSF9O75901 435 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 OATP04181 439 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 FESP07332 822 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 CALML3P27482 149 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 SSTR3P32745 418 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-202ENST00000343599 ACTR2P61160 394 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 HSDL1Q3SXM5 330 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 SPDYE1Q8NFV5 336 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-202ENST00000343599 TBC1D5Q92609 795 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 PLEKHA5Q9HAU0 1116 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 ZNF302Q9NR11 478 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 KLC4Q9NSK0 619 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 ZSWIM5Q9P217 1185 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.95□□□□□ -1.14
ZNF540-202ENST00000343599 MRFAP1Q9Y605 127 aa7.95□□□□□ -1.14
ZNF540-202ENST00000343599 MUC22E2RYF6 1773 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-202ENST00000343599 MINDY4BA8MYZ0 360 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 C10orf142B7Z368 130 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MYO1FO00160 1098 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 PRPF6O94906 941 aaKnown RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 FGFR3P22607 806 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 TGM1P22735 817 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 DNM2P50570 870 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 WTAPQ15007 396 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 YTHDF3Q7Z739 585 aaKnown RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 SPATS2Q86XZ4 545 aaKnown RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 CCDC50Q8IVM0 306 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 EZH1Q92800 747 aaPredicted RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 KHSRPQ92945 711 aaKnown RBP eCLIP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 HVCN1Q96D96 273 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 NOTCH4Q99466 2003 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 AHCYL1O43865 530 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 URI1O94763 535 aaPredicted RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MAPTP10636 758 aaKnown RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 CCT5P48643 541 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 HSP90B2PQ58FF3 399 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 ARMC3Q5W041 872 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 SDE2Q6IQ49 451 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 BRAPQ7Z569 592 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 COLGALT2Q8IYK4 626 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 TCEAL8Q8IYN2 117 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MSANTD4Q8NCY6 345 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 ZSWIM4Q9H7M6 989 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MYO6Q9UM54 1294 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 TRPC6Q9Y210 931 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 KANSL1LA0AUZ9 987 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 STX6O43752 255 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MYOGP15173 224 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 TYMPP19971 482 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 SYT1P21579 422 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 PPP2R3AQ06190 1150 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 ANGPT1Q15389 498 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MLF2Q15773 248 aaPredicted RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 NOMO2Q5JPE7 1267 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 C11orf96Q7Z7L8 435 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 RALGPS2Q86X27 583 aaPredicted RBP7.94□□□□□ -1.14
ZNF540-202ENST00000343599 C1orf210Q8IVY1 113 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MFN1Q8IWA4 741 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 SPEM1Q8N4L4 309 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 BCO2Q9BYV7 579 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 TNMDQ9H2S6 317 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 CLSTN2Q9H4D0 955 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 VIPAS39Q9H9C1 493 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 MTRRQ9UBK8 725 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 PCDHA6Q9UN73 950 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 WASF3Q9UPY6 502 aa7.94□□□□□ -1.14
ZNF540-202ENST00000343599 PCDHGC5Q9Y5F6 944 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms