RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 STX11O75558 287 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 PGK2P07205 417 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 CNOT7Q9UIV1 285 aaKnown RBP18.46■□□□□ 0.55
SMAD4-201ENST00000342988 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
SMAD4-201ENST00000342988 RC3H1Q5TC82 1133 aaKnown RBP18.46■□□□□ 0.55
SMAD4-201ENST00000342988 LIN54Q6MZP7 749 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 PDXDC2PQ6P474 469 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 FANCBQ8NB91 859 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 PPP1R36Q96LQ0 422 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 NEK6Q9HC98 313 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 LATS2Q9NRM7 1088 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 ATP1A1P05023 1023 aaKnown RBP18.46■□□□□ 0.55
SMAD4-201ENST00000342988 CAMK1Q14012 370 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 SPASTQ9UBP0 616 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 COPB2P35606 906 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 PHKA2P46019 1235 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 IRAK1BP1Q5VVH5 260 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 TRIM48Q8IWZ4 208 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 LCORLQ8N3X6 602 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 CCDC17Q96LX7 622 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 SERPINB12Q96P63 405 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 FAM192AQ9GZU8 254 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 VTA1Q9NP79 307 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 ATPIF1Q9UII2 106 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 ACEP12821 1306 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 RIMS2Q9UQ26 1411 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 TCP11X1B4DZS4 312 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 MED26O95402 600 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 SDC4P31431 198 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 KPNA1P52294 538 aaPredicted RBP18.46■□□□□ 0.55
SMAD4-201ENST00000342988 ZNF394Q53GI3 561 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 CLYBLQ8N0X4 340 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 JAK3P52333 1124 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 KBTBD12Q3ZCT8 623 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 LRRC47Q8N1G4 583 aaKnown RBP18.46■□□□□ 0.55
SMAD4-201ENST00000342988 OSCP1Q8WVF1 389 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 MXD3Q9BW11 206 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 LMBRD1Q9NUN5 540 aa18.46■□□□□ 0.55
SMAD4-201ENST00000342988 CCNL1Q9UK58 526 aaPredicted RBP18.46■□□□□ 0.55
SMAD4-201ENST00000342988 SERPINB8P50452 374 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 DDR2Q16832 855 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 SPANXN2Q5MJ10 180 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 MMGT1Q8N4V1 131 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 KRT35Q92764 455 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 CYP39A1Q9NYL5 469 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 PLIN5Q00G26 463 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 CACHD1Q5VU97 1274 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 PJA1Q8NG27 643 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 MTO1Q9Y2Z2 717 aaKnown RBP18.45■□□□□ 0.54
SMAD4-201ENST00000342988 ATN1P54259 1190 aaPredicted RBP18.45■□□□□ 0.54
SMAD4-201ENST00000342988 NLRP14Q86W24 1093 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 CHAMP1Q96JM3 812 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 IFNA14P01570 189 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 ARF5P84085 180 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 RSBN1Q5VWQ0 802 aaPredicted RBP18.45■□□□□ 0.54
SMAD4-201ENST00000342988 USP13Q92995 863 aaPredicted RBP18.45■□□□□ 0.54
SMAD4-201ENST00000342988 CD274Q9NZQ7 290 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 TSR3Q9UJK0 312 aaKnown RBP18.45■□□□□ 0.54
SMAD4-201ENST00000342988 PFASO15067 1338 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 ORC2Q13416 577 aaPredicted RBP18.45■□□□□ 0.54
SMAD4-201ENST00000342988 FAM167AQ96KS9 214 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 CLCN6P51797 869 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 STAT4Q14765 748 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
SMAD4-201ENST00000342988 CLDN3O15551 220 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 PSTPIP1O43586 416 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 CSNK2BP67870 215 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 RFX8Q6ZV50 586 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 PARVAQ9NVD7 372 aa18.45■□□□□ 0.54
SMAD4-201ENST00000342988 GALNT4Q8N4A0 578 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 ADGRA2Q96PE1 1338 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 A0A1W2PQ27 194 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 A0A1W2PQ64 194 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 A0A1W2PQD8 194 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 ZNF862O60290 1169 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 PALB2Q86YC2 1186 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 PNMA6AP0CW24 399 aaPredicted RBP18.44■□□□□ 0.54
SMAD4-201ENST00000342988 GGCXP38435 758 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 ABRAXAS1Q6UWZ7 409 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 ANKRD27Q96NW4 1050 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 CARMIL3Q8ND23 1372 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 ASMTLO95671 621 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 PSMD4P55036 377 aaKnown RBP18.44■□□□□ 0.54
SMAD4-201ENST00000342988 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 FAM89AQ96GI7 184 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 RRAGDQ9NQL2 400 aaPredicted RBP18.44■□□□□ 0.54
SMAD4-201ENST00000342988 PDS5AQ29RF7 1337 aaKnown RBP18.44■□□□□ 0.54
SMAD4-201ENST00000342988 STARP49675 285 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 EIF2B2P49770 351 aaKnown RBP18.44■□□□□ 0.54
SMAD4-201ENST00000342988 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 HEATR4Q86WZ0 1026 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 CCDC185Q8N715 623 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 PTPRN2Q92932 1015 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 SLC9A7Q96T83 725 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 PRKD2Q9BZL6 878 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 BTN3A3O00478 584 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 CAND2O75155 1236 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 FCGR1AP12314 374 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 ARF4P18085 180 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 274.3 ms