RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 MSTO1Q9BUK6 570 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 GRHL1Q9NZI5 618 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 ANAPC7Q9UJX3 599 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 ATP8A1Q9Y2Q0 1164 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 PCDHB2Q9Y5E7 798 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 UMODL1Q5DID0 1318 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 MROH7Q68CQ1 1323 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 ADGRA2Q96PE1 1338 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 HSPA6P17066 643 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 SSTR3P32745 418 aaPredicted RBP21.49■■□□□ 1.03
SPG7-202ENST00000341316 KCNV1Q6PIU1 500 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 CCDC137Q6PK04 289 aaKnown RBP21.49■■□□□ 1.03
SPG7-202ENST00000341316 NCAPG2Q86XI2 1143 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 ARFGAP2Q8N6H7 521 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 PPANQ9NQ55 473 aaKnown RBP21.49■■□□□ 1.03
SPG7-202ENST00000341316 KCNG1Q9UIX4 513 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 CNTNAP2Q9UHC6 1331 aa21.49■■□□□ 1.03
SPG7-202ENST00000341316 ADM5C9JUS6 153 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 FAM107AO95990 144 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 SCP2P22307 547 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 HNRNPH1P31943 449 aaKnown RBP21.48■■□□□ 1.03
SPG7-202ENST00000341316 RPL21P46778 160 aaKnown RBP21.48■■□□□ 1.03
SPG7-202ENST00000341316 FNTAP49354 379 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 PLTPP55058 493 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 MTMR3Q13615 1198 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 LY6KQ17RY6 165 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 CNPY4Q8N129 248 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 FBXO25Q8TCJ0 367 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 IPO4Q8TEX9 1081 aaKnown RBP21.48■■□□□ 1.03
SPG7-202ENST00000341316 CYFIP2Q96F07 1278 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 SPATC1LQ9H0A9 340 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 EPB41L4BQ9H329 900 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 GGPS1O95749 300 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 HARSP12081 509 aaKnown RBP21.48■■□□□ 1.03
SPG7-202ENST00000341316 RWDD2BP57060 319 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 CYP1B1Q16678 543 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 BCCIPQ9P287 314 aaKnown RBP eCLIP21.48■■□□□ 1.033e-6■□□□□ 8.6
SPG7-202ENST00000341316 SIP14410 1827 aa21.48■■□□□ 1.03
SPG7-202ENST00000341316 PTPRFP10586 1907 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 FSBPO95073 299 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 CYP1A1P04798 512 aaPredicted RBP21.47■■□□□ 1.03
SPG7-202ENST00000341316 MAPK4P31152 587 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 KCNJ1P48048 391 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 STAT5BP51692 787 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 DRG2P55039 364 aaKnown RBP21.47■■□□□ 1.03
SPG7-202ENST00000341316 CUL2Q13617 745 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 SLFN12LQ6IEE8 588 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 GADL1Q6ZQY3 521 aa21.47■■□□□ 1.03
SPG7-202ENST00000341316 SRRM3A6NNA2 597 aaPredicted RBP21.46■■□□□ 1.03
SPG7-202ENST00000341316 CLDN3O15551 220 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 TCF7P36402 384 aaPredicted RBP21.46■■□□□ 1.03
SPG7-202ENST00000341316 DAB2IPQ5VWQ8 1189 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 PASD1Q8IV76 773 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 FAM81BQ96LP2 452 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 CGRRF1Q99675 332 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 SLC12A6Q9UHW9 1150 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 NUB1Q9Y5A7 615 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 A0A0G2JMZ2 1700 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 IRF6O14896 467 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 ADCY3O60266 1144 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 DDNO94850 711 aaPredicted RBP21.46■■□□□ 1.03
SPG7-202ENST00000341316 COILP38432 576 aaPredicted RBP21.46■■□□□ 1.03
SPG7-202ENST00000341316 RNF187Q5TA31 235 aaPredicted RBP21.46■■□□□ 1.03
SPG7-202ENST00000341316 RUFY4Q6ZNE9 571 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 YTHDF3Q7Z739 585 aaKnown RBP21.46■■□□□ 1.03
SPG7-202ENST00000341316 PLCD3Q8N3E9 789 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 PRPF31Q8WWY3 499 aaKnown RBP21.46■■□□□ 1.03
SPG7-202ENST00000341316 RASAL2Q9UJF2 1139 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 PTPN22Q9Y2R2 807 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 PCNTO95613 3336 aa21.46■■□□□ 1.03
SPG7-202ENST00000341316 ARIH2O95376 493 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 TMOD1P28289 359 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 RFC5P40937 340 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 TNFSF9P41273 254 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 CENPCQ03188 943 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 UBAP2Q5T6F2 1119 aaKnown RBP21.45■■□□□ 1.02
SPG7-202ENST00000341316 TMEM270Q6UE05 265 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 MON1BQ7L1V2 547 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 ZNF677Q86XU0 584 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 HERPUD2Q9BSE4 406 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 TMEM134Q9H6X4 195 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 AVENQ9NQS1 362 aaPredicted RBP21.45■■□□□ 1.02
SPG7-202ENST00000341316 NRBP2Q9NSY0 501 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 PCDHB4Q9Y5E5 795 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 DCDC2CA8MYV0 355 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 H0YHG0 523 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 CNMDO75829 334 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 MARK3P27448 753 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 IFT88Q13099 833 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 MKRN4PQ13434 485 aaPredicted RBP21.45■■□□□ 1.02
SPG7-202ENST00000341316 TRIM50Q86XT4 487 aa21.45■■□□□ 1.02
SPG7-202ENST00000341316 MAFO75444 373 aaPredicted RBP21.44■■□□□ 1.02
SPG7-202ENST00000341316 LDHAP00338 332 aaKnown RBP21.44■■□□□ 1.02
SPG7-202ENST00000341316 SHBGP04278 402 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 PGK2P07205 417 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 CLTAP09496 248 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 NSFP46459 744 aaKnown RBP21.44■■□□□ 1.02
SPG7-202ENST00000341316 ELP3Q9H9T3 547 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 NOVA2Q9UNW9 492 aaKnown RBP21.44■■□□□ 1.02
SPG7-202ENST00000341316 SOCS7O14512 581 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms