RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 OR5B17Q8NGF7 314 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 GOLGA5Q8TBA6 731 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 P2RX5Q93086 422 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 TSG101Q99816 390 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 GPR62Q9BZJ7 368 aa14.32□□□□□ -0.12
TUBD1-202ENST00000340993 PER2O15055 1255 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 TMEM191BP0C7N4 346 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 TRIM49P0CI25 452 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 TRIM49CP0CI26 452 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 TNNI1P19237 187 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 PPM1AP35813 382 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 DLG4P78352 724 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 CYP24A1Q07973 514 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 CAMK1Q14012 370 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 SKIV2LQ15477 1246 aaKnown RBP14.31□□□□□ -0.12
TUBD1-202ENST00000340993 HSP90AA4PQ58FG1 418 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 XKR4Q5GH76 650 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 PLEKHO2Q8TD55 490 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 TMEM175Q9BSA9 504 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 COLEC11Q9BWP8 271 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 PLEKHA5Q9HAU0 1116 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 TLR9Q9NR96 1032 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 MTCH2Q9Y6C9 303 aa14.31□□□□□ -0.12
TUBD1-202ENST00000340993 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.3□□□□□ -0.12
TUBD1-202ENST00000340993 HIDE1A8MVS5 230 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 AKAP3O75969 853 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 RB1P06400 928 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 UPP1Q16831 310 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 ZCWPW2Q504Y3 356 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 GPR153Q6NV75 609 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 FUT10Q6P4F1 479 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 ADGRD2Q7Z7M1 963 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 BEST2Q8NFU1 509 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 DPP3Q9NY33 737 aa14.3□□□□□ -0.12
TUBD1-202ENST00000340993 UBQLN1Q9UMX0 589 aaKnown RBP14.3□□□□□ -0.12
TUBD1-202ENST00000340993 IL18RAPO95256 599 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 ITGB3P05106 788 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 RPL17P18621 184 aaKnown RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 CCNE1P24864 410 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 POLR2BP30876 1174 aaKnown RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 RBM10P98175 930 aaKnown RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 PAK1Q13153 545 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 FAM171A1Q5VUB5 890 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 FAM186BQ8IYM0 893 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 PUF60Q9UHX1 559 aaKnown RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 TRAF3IP3Q9Y228 551 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 TIMM13Q9Y5L4 95 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 LRRIQ3A6PVS8 624 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 PTPROQ16827 1216 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 TCEAL5Q5H9L2 206 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 DCAF17Q5H9S7 520 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 CENPPQ6IPU0 288 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 KIAA1841Q6NSI8 718 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-202ENST00000340993 CSGALNACT2Q8N6G5 542 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 DMAC2Q9NW81 257 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 AGAP1Q9UPQ3 857 aa14.29□□□□□ -0.12
TUBD1-202ENST00000340993 VCANP13611 3396 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 CETN3O15182 167 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 TKTP29401 623 aaKnown RBP14.28□□□□□ -0.12
TUBD1-202ENST00000340993 NRIP1P48552 1158 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 NLRP12P59046 1061 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 PLCB3Q01970 1234 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 BIRC3Q13489 604 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 TCERG1LQ5VWI1 586 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 SPATA1Q5VX52 437 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 C9orf57Q5W0N0 161 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 SASS6Q6UVJ0 657 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 CD300LGQ6UXG3 332 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 C12orf56Q8IXR9 622 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 C1orf127Q8N9H9 656 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 MRPL38Q96DV4 380 aaKnown RBP14.28□□□□□ -0.12
TUBD1-202ENST00000340993 DHTKD1Q96HY7 919 aaPredicted RBP14.28□□□□□ -0.12
TUBD1-202ENST00000340993 ANKRD36BP1Q96IX9 119 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 FBXL18Q96ME1 805 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
TUBD1-202ENST00000340993 ASB7Q9H672 318 aa14.28□□□□□ -0.12
TUBD1-202ENST00000340993 CGNQ9P2M7 1197 aaKnown RBP14.28□□□□□ -0.12
TUBD1-202ENST00000340993 SF3B1O75533 1304 aaKnown RBP eCLIP14.27□□□□□ -0.124e-6■■■■■ 129.2
TUBD1-202ENST00000340993 KIAA0391O15091 583 aaKnown RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 XPOTO43592 962 aaKnown RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 CXCL14O95715 111 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 TNNC2P02585 160 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 RPL13P26373 211 aaKnown RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 SNRPFP62306 86 aaKnown RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 BFSP1Q12934 665 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 PSMD6Q15008 389 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 NFKBIBQ15653 356 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 ZBTB6Q15916 424 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 RTP2Q5QGT7 225 aa14.27□□□□□ -0.12
TUBD1-202ENST00000340993 C11orf57Q6ZUT1 292 aaPredicted RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.12
TUBD1-202ENST00000340993 CD302Q8IX05 232 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms