RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TRIM68Q6AZZ1 485 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 RRAGAQ7L523 313 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 SPATA21Q7Z572 469 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 CDR2LQ86X02 465 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-201ENST00000340611 MAGEC3Q8TD91 643 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 ELMO3Q96BJ8 720 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 ALS2CR12Q96Q35 445 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 TLR10Q9BXR5 811 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 SMARCAD1Q9H4L7 1026 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 RNF186Q9NXI6 227 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 TBX20Q9UMR3 447 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 TRIP12Q14669 1992 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-201ENST00000340611 RBM47A0AV96 593 aaKnown RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 MMP3P08254 477 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 GFPT1Q06210 699 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 DNAJC14Q6Y2X3 702 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 RHPN2Q8IUC4 686 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 MCPH1Q8NEM0 835 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 KIFAP3Q92845 792 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 ZBTB45Q96K62 511 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 SLC5A4Q9NY91 659 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 HEXIM1O94992 359 aaKnown RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 FAM107AO95990 144 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 ADSSP30520 456 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 GTF2BQ00403 316 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 CAPSQ13938 189 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 MAN2A1Q16706 1144 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 EDRF1Q3B7T1 1238 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 SEZ6Q53EL9 994 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 SLC39A4Q6P5W5 647 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 C6orf89Q6UWU4 347 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 HS2ST1Q7LGA3 356 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 TBC1D1Q86TI0 1168 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 CAVIN3Q969G5 261 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 HVCN1Q96D96 273 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 H3BRB1 525 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 EXOC3O60645 756 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 LRRN2O75325 713 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 DLG4P78352 724 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 BICD1Q96G01 975 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 NLRP4Q96MN2 994 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 APBA2Q99767 749 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 TUT1Q9H6E5 874 aaKnown RBP16.15■□□□□ 0.18
BRAT1-201ENST00000340611 ERAP1Q9NZ08 941 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 PLAGL2Q9UPG8 496 aa16.15■□□□□ 0.18
BRAT1-201ENST00000340611 LRRC53A6NM62 1247 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 MGRN1O60291 552 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 MAPTP10636 758 aaKnown RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 TMEM62Q0P6H9 643 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 MTA1Q13330 715 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 ZNF572Q7Z3I7 529 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 TRIM59Q8IWR1 403 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 CD99L2Q8TCZ2 262 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 HHIPL1Q96JK4 782 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 IFT74Q96LB3 600 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 ACCSQ96QU6 501 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 EMSYQ7Z589 1322 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 MAP3K13O43283 966 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 MAFO75444 373 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 HOXC6P09630 235 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 ACTN1P12814 892 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 MDH1P40925 334 aaKnown RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 ITIH3Q06033 890 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 KCNH2Q12809 1159 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 EFCAB12Q6NXP0 572 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 PLPPR4Q7Z2D5 763 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 IQCKQ8N0W5 287 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 ERGIC2Q96RQ1 377 aa16.14■□□□□ 0.17
BRAT1-201ENST00000340611 SUDS3Q9H7L9 328 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 PACSIN2Q9UNF0 486 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-201ENST00000340611 HNRNPDLO14979 420 aaKnown RBP16.13■□□□□ 0.17
BRAT1-201ENST00000340611 FGFR1OPO95684 399 aaKnown RBP16.13■□□□□ 0.17
BRAT1-201ENST00000340611 FTCDO95954 541 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 PGK1P00558 417 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 VTNP04004 478 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 KLRC1P26715 233 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 TMOD1P28289 359 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 TPP2P29144 1249 aaPredicted RBP16.13■□□□□ 0.17
BRAT1-201ENST00000340611 ARL2P36404 184 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 FCGRTP55899 365 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 IFFO1Q0D2I5 559 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 KCNMA1Q12791 1236 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 FAM186BQ8IYM0 893 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 KCNV2Q8TDN2 545 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 CEP63Q96MT8 703 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 SETD4Q9NVD3 440 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 CORO1CQ9ULV4 474 aaPredicted RBP16.13■□□□□ 0.17
BRAT1-201ENST00000340611 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
BRAT1-201ENST00000340611 FAM170AA1A519 330 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 AHCYL1O43865 530 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 FESP07332 822 aa16.13■□□□□ 0.17
BRAT1-201ENST00000340611 ABCD1P33897 745 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms