RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 PODXLO00592 558 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 XPOTO43592 962 aaKnown RBP18.12■□□□□ 0.49
SFN-201ENST00000339276 CYP3A5P20815 502 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 TFAMQ00059 246 aaKnown RBP18.12■□□□□ 0.49
SFN-201ENST00000339276 ADGRE1Q14246 886 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 UPP1Q16831 310 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 ZC3H3Q8IXZ2 948 aaKnown RBP18.12■□□□□ 0.49
SFN-201ENST00000339276 BEST2Q8NFU1 509 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 POF1BQ8WVV4 589 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 MYLIPQ8WY64 445 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 CCDC127Q96BQ5 260 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 CDX2Q99626 313 aaPredicted RBP18.12■□□□□ 0.49
SFN-201ENST00000339276 COLEC11Q9BWP8 271 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 VN1R3Q9BXE9 311 aa18.12■□□□□ 0.49
SFN-201ENST00000339276 BICDL2A1A5D9 508 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 CETN3O15182 167 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 DLATP10515 647 aaKnown RBP18.11■□□□□ 0.49
SFN-201ENST00000339276 FKBP3Q00688 224 aaKnown RBP18.11■□□□□ 0.49
SFN-201ENST00000339276 KRT17Q04695 432 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 CAMK1Q14012 370 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 SURF1Q15526 300 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 CD300LGQ6UXG3 332 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 NT5DC4Q86YG4 428 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 FAM186BQ8IYM0 893 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 OR5B17Q8NGF7 314 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 DDX27Q96GQ7 796 aaKnown RBP18.11■□□□□ 0.49
SFN-201ENST00000339276 MED15Q96RN5 788 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 POP1Q99575 1024 aaKnown RBP18.11■□□□□ 0.49
SFN-201ENST00000339276 ADAM28Q9UKQ2 775 aa18.11■□□□□ 0.49
SFN-201ENST00000339276 PPEF2O14830 753 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 B3GAT3O94766 335 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 LRPAP1P30533 357 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 RPL9P32969 192 aaKnown RBP18.1■□□□□ 0.49
SFN-201ENST00000339276 PSMC2P35998 433 aaKnown RBP18.1■□□□□ 0.49
SFN-201ENST00000339276 FUT10Q6P4F1 479 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 DCLRE1AQ6PJP8 1040 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 FOXR2Q6PJQ5 311 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 SASS6Q6UVJ0 657 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 DDX53Q86TM3 631 aaKnown RBP18.1■□□□□ 0.49
SFN-201ENST00000339276 WDR49Q8IV35 697 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 FNBP1Q96RU3 617 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 GAS2L1Q99501 681 aaPredicted RBP18.1■□□□□ 0.49
SFN-201ENST00000339276 CGRRF1Q99675 332 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 MTMR12Q9C0I1 747 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 INTS13Q9NVM9 706 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 DPP3Q9NY33 737 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 RWDD2AQ9UIY3 292 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 LZTS1Q9Y250 596 aa18.1■□□□□ 0.49
SFN-201ENST00000339276 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.1■□□□□ 0.49
SFN-201ENST00000339276 LRRIQ3A6PVS8 624 aaPredicted RBP18.09■□□□□ 0.49
SFN-201ENST00000339276 TMEM189-UBE2V1I3L0A0 370 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 MAPK13O15264 365 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 TADA2AO75478 443 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 EFEMP2O95967 443 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 TMEM191BP0C7N4 346 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 TNNI1P19237 187 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 IGFBP4P22692 258 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 IRS1P35568 1242 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 ERVFC1P60507 584 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 DLG4P78352 724 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 UBE3AQ05086 875 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 SKOR2Q2VWA4 1001 aaPredicted RBP18.09■□□□□ 0.49
SFN-201ENST00000339276 SCARA3Q6AZY7 606 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 CSGALNACT2Q8N6G5 542 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 C1orf127Q8N9H9 656 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 PARD3BQ8TEW8 1205 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 CACTINQ8WUQ7 758 aaKnown RBP18.09■□□□□ 0.49
SFN-201ENST00000339276 MKNK1Q9BUB5 465 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 GPR62Q9BZJ7 368 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 LMAN2LQ9H0V9 348 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 TLR9Q9NR96 1032 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 PUF60Q9UHX1 559 aaKnown RBP18.09■□□□□ 0.49
SFN-201ENST00000339276 DACH1Q9UI36 760 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 PCDHGC5Q9Y5F6 944 aa18.09■□□□□ 0.49
SFN-201ENST00000339276 I3L4J1 428 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 SLC16A3O15427 465 aaKnown RBP18.08■□□□□ 0.49
SFN-201ENST00000339276 EPB41P11171 864 aaKnown RBP18.08■□□□□ 0.49
SFN-201ENST00000339276 BRCC3P46736 316 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 STX1AQ16623 288 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 C9orf57Q5W0N0 161 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 C11orf57Q6ZUT1 292 aaPredicted RBP18.08■□□□□ 0.49
SFN-201ENST00000339276 TAS1R1Q7RTX1 841 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 RNF168Q8IYW5 571 aaPredicted RBP18.08■□□□□ 0.49
SFN-201ENST00000339276 VPS52Q8N1B4 723 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 TMC2Q8TDI7 906 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 ZNF516Q92618 1163 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 MRPL38Q96DV4 380 aaKnown RBP18.08■□□□□ 0.49
SFN-201ENST00000339276 BORCS6Q96GS4 357 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 MTCH2Q9Y6C9 303 aa18.08■□□□□ 0.49
SFN-201ENST00000339276 SF3B1O75533 1304 aaKnown RBP eCLIP18.07■□□□□ 0.48
SFN-201ENST00000339276 SCN1AP35498 2009 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 ANO9A1A5B4 782 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 PIRO00625 290 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 FSCN2O14926 492 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 TNNC2P02585 160 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 ITGB3P05106 788 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 TRIM49P0CI25 452 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 TRIM49CP0CI26 452 aa18.07■□□□□ 0.48
SFN-201ENST00000339276 KRT13P13646 458 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms