RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 KCNA1Q09470 495 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 FAAP100Q0VG06 881 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 PDCLQ13371 301 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 BYSLQ13895 437 aaKnown RBP11.56□□□□□ -0.56
RTN3-201ENST00000338850 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 DCAF12L1Q5VU92 463 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 PCNX4Q63HM2 1172 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 PPP1R2P3Q6NXS1 205 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 C6orf89Q6UWU4 347 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 CYFIP1Q7L576 1253 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 ENOSF1Q7L5Y1 443 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 USP37Q86T82 979 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 NLRP14Q86W24 1093 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 GLYCTKQ8IVS8 523 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 TPH2Q8IWU9 490 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 C4orf19Q8IY42 314 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 FAM71AQ8IYT1 594 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 CNPY4Q8N129 248 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 PCSK9Q8NBP7 692 aaKnown RBP11.56□□□□□ -0.56
RTN3-201ENST00000338850 CYP2W1Q8TAV3 490 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 ZNF473Q8WTR7 871 aaKnown RBP11.56□□□□□ -0.56
RTN3-201ENST00000338850 GLT1D1Q96MS3 346 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 ZSWIM1Q9BR11 485 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 CCDC134Q9H6E4 229 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 SPC25Q9HBM1 224 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 ANKEF1Q9NU02 776 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 TBC1D22BQ9NU19 505 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 TMEM39AQ9NV64 488 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 GTF3C4Q9UKN8 822 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 CCPG1Q9ULG6 757 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 EXOC7Q9UPT5 735 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 MCM3APO60318 1980 aa11.56□□□□□ -0.56
RTN3-201ENST00000338850 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.55□□□□□ -0.56
RTN3-201ENST00000338850 CCDC169A6NNP5 214 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 MYO1FO00160 1098 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 CFBP00751 764 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 FGGP02679 453 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 ASGR1P07306 291 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 RAG1P15918 1043 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 SFNP31947 248 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 MAN1A1P33908 653 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 CDK7P50613 346 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 VAMP7P51809 220 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 JAK3P52333 1124 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 GPC5P78333 572 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 DR1Q01658 176 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 TNFAIP2Q03169 654 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 TNFAIP8L3Q5GJ75 292 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 NSMFQ6X4W1 530 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 MMS22LQ6ZRQ5 1243 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
RTN3-201ENST00000338850 MICALL1Q8N3F8 863 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 SH2D3CQ8N5H7 860 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 XXYLT1Q8NBI6 393 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 PIGOQ8TEQ8 1089 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 MAIP1Q8WWC4 291 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 SHC3Q92529 594 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 CD101Q93033 1021 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 FBXL18Q96ME1 805 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 PLVAPQ9BX97 442 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 STMN4Q9H169 189 aaPredicted RBP11.55□□□□□ -0.56
RTN3-201ENST00000338850 NEUROG2Q9H2A3 272 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 PABPC3Q9H361 631 aaKnown RBP11.55□□□□□ -0.56
RTN3-201ENST00000338850 AMACRQ9UHK6 382 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 KCNG1Q9UIX4 513 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 TBX21Q9UL17 535 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 IGSF9BQ9UPX0 1349 aa11.55□□□□□ -0.56
RTN3-201ENST00000338850 K7ENM7 598 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 KIAA0391O15091 583 aaKnown RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 TTI1O43156 1089 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 DAPK3O43293 454 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 DKC1O60832 514 aaKnown RBP eCLIP11.54□□□□□ -0.56
RTN3-201ENST00000338850 CYP1A2P05177 515 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 PTGIRP43119 386 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 QARSP47897 775 aaKnown RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 RARRES1P49788 294 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 GPC3P51654 580 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 BEX3Q00994 111 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 FPGSQ05932 587 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 ADCY2Q08462 1091 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 SLMAPQ14BN4 828 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 ZC2HC1CQ53FD0 456 aaPredicted RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 GNASQ5JWF2 1037 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 SWT1Q5T5J6 900 aaKnown RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 SEL1L2Q5TEA6 688 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 MFSD5Q6N075 450 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 JAMLQ86YT9 394 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 SYCP3Q8IZU3 236 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 SPIRE2Q8WWL2 714 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 GUCD1Q96NT3 240 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms