RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SLC18A3Q16572 532 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 THEMIS2Q5TEJ8 643 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 MFSD14CQ5VZR4 134 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 RMDN1Q96DB5 314 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 CYP4F11Q9HBI6 524 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.74□□□□□ -0.21
HLCS-201ENST00000336648 LRRIQ3A6PVS8 624 aaPredicted RBP13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 RXRBP28702 533 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 DAB2IPQ5VWQ8 1189 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 USP17L6PQ6QN14 398 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 CYB5R4Q7L1T6 521 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 TEX2Q8IWB9 1127 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 SIRT2Q8IXJ6 389 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 ARHGEF26Q96DR7 871 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 C19orf60Q96EN9 201 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 MTSS1O43312 755 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 STX3Q13277 289 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 SNX17Q15036 470 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 PIGBQ92521 554 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
HLCS-201ENST00000336648 SENP7Q9BQF6 1050 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 SPON2Q9BUD6 331 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 POLIQ9UNA4 740 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
HLCS-201ENST00000336648 RBP5P82980 135 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 QRICH1Q2TAL8 776 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 NLRP9Q7RTR0 991 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 TRAPPC11Q7Z392 1133 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 BBS7Q8IWZ6 715 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 ASZ1Q8WWH4 475 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 TADA1Q96BN2 335 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 MMP19Q99542 508 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 SAMD9Q5K651 1589 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 ENO4A6NNW6 628 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 FCER1AP12319 257 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 ST13P50502 369 aaKnown RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 NME3Q13232 169 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 DHX40Q8IX18 779 aaKnown RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 KIF12Q96FN5 646 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 USP15Q9Y4E8 981 aaPredicted RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 KDM5CP41229 1560 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 PRPF4O43172 522 aaKnown RBP eCLIP13.73□□□□□ -0.21
HLCS-201ENST00000336648 NCK2O43639 380 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 DGAT1O75907 488 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 ADORA2BP29275 332 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 HSPA13P48723 471 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 KLC1Q07866 573 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 MINPP1Q9UNW1 487 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 UBN2Q6ZU65 1347 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 ANKRD65E5RJM6 399 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 KCNA3P22001 575 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 SERPINB3P29508 390 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 KRR1Q13601 381 aaKnown RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 P4HA2O15460 535 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 ACADSBP45954 432 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 ANGPT1Q15389 498 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 PDLIM2Q96JY6 352 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 OSBPL10Q9BXB5 764 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 PAK5Q9P286 719 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 APEX2Q9UBZ4 518 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 LSM7Q9UK45 103 aaKnown RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 RALBP11234 206 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 IMPDH2P12268 514 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 SPRP35270 261 aaPredicted RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
HLCS-201ENST00000336648 ARID5BQ14865 1188 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 TMEM154Q6P9G4 183 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 C1orf54Q8WWF1 131 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 PGBD4Q96DM1 585 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 NDEL1Q9GZM8 345 aa13.73□□□□□ -0.21
HLCS-201ENST00000336648 FAM180AQ6UWF9 173 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 CCDC103Q8IW40 242 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 ADGRF4Q8IZF3 695 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 ST13P5Q8NFI4 369 aaPredicted RBP13.72□□□□□ -0.21
HLCS-201ENST00000336648 VPS33BQ9H267 617 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 UBAP1Q9NZ09 502 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 F5H6K3 240 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 TOMM70O94826 608 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 KLRC3Q07444 240 aa13.72□□□□□ -0.21
HLCS-201ENST00000336648 PKN3Q6P5Z2 889 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms