RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ARHGAP1Q07960 439 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 UBAP2Q5T6F2 1119 aaKnown RBP13.47□□□□□ -0.25
LIMK1-201ENST00000336180 CYP4A22Q5TCH4 519 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 GPATCH11Q8N954 259 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 ATG4AQ8WYN0 398 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 ACO2Q99798 780 aaKnown RBP13.47□□□□□ -0.25
LIMK1-201ENST00000336180 LRRC4CQ9HCJ2 640 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
LIMK1-201ENST00000336180 DNAJC17Q9NVM6 304 aaKnown RBP13.47□□□□□ -0.25
LIMK1-201ENST00000336180 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-201ENST00000336180 NFICP08651 508 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 ZBTB48P10074 688 aaPredicted RBP13.46□□□□□ -0.25
LIMK1-201ENST00000336180 GNA15P30679 374 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 CUL2Q13617 745 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 ATF7IP2Q5U623 682 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 TAPT1Q6NXT6 567 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 SLFN11Q7Z7L1 901 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 ZBTB8OSQ8IWT0 167 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 NPLOC4Q8TAT6 608 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 AENQ8WTP8 325 aaKnown RBP13.46□□□□□ -0.25
LIMK1-201ENST00000336180 LMBR1Q8WVP7 490 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 C1orf54Q8WWF1 131 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 ARL8AQ96BM9 186 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 MRPL4Q9BYD3 311 aaKnown RBP13.46□□□□□ -0.25
LIMK1-201ENST00000336180 ISCUQ9H1K1 167 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 ADAM21Q9UKJ8 722 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 COQ4Q9Y3A0 265 aa13.46□□□□□ -0.25
LIMK1-201ENST00000336180 PI4K2BG5E9Z4 385 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 P4HA2O15460 535 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 DYNC1LI2O43237 492 aaPredicted RBP13.46□□□□□ -0.26
LIMK1-201ENST00000336180 SNAI1O95863 264 aaPredicted RBP13.46□□□□□ -0.26
LIMK1-201ENST00000336180 CD19P15391 556 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 GTF2H1P32780 548 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 CYP2C19P33261 490 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 CCL14Q16627 93 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 NBPF20Q3BBV1 942 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 SLC17A8Q8NDX2 589 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 HVCN1Q96D96 273 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 L3MBTL3Q96JM7 780 aaPredicted RBP13.46□□□□□ -0.26
LIMK1-201ENST00000336180 FAM204AQ9H8W3 233 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 SNX24Q9Y343 169 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 NCANO14594 1321 aa13.46□□□□□ -0.26
LIMK1-201ENST00000336180 GOLGA6BA6NDN3 693 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 TGFB3P10600 412 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 SCP2P22307 547 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 TNNC1P63316 161 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 SCFD2Q8WU76 684 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 GBA2Q9HCG7 927 aaPredicted RBP13.45□□□□□ -0.26
LIMK1-201ENST00000336180 TARSL2A2RTX5 802 aaKnown RBP13.45□□□□□ -0.26
LIMK1-201ENST00000336180 TMEM191BP0C7N4 346 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 SMPD1P17405 629 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 RFC5P40937 340 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 ZNF200P98182 395 aaPredicted RBP13.45□□□□□ -0.26
LIMK1-201ENST00000336180 TRPC3Q13507 836 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 MAP9Q49MG5 647 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 GLRA4Q5JXX5 417 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 C15orf39Q6ZRI6 1047 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 GPR142Q7Z601 462 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 SYCE1Q8N0S2 351 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 ZSWIM1Q9BR11 485 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 HMGXB4Q9UGU5 601 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 DICER1Q9UPY3 1922 aaKnown RBP13.45□□□□□ -0.26
LIMK1-201ENST00000336180 SMIM23A6NLE4 172 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 GOLGA8SH3BPF8 625 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 TOM1L1O75674 476 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 MAPK4P31152 587 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 RTP1P59025 263 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 BEX3Q00994 111 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 CLEC16AQ2KHT3 1053 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 IER5Q5VY09 327 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 USP37Q86T82 979 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 KIAA0319LQ8IZA0 1049 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 TAB3Q8N5C8 712 aaPredicted RBP13.45□□□□□ -0.26
LIMK1-201ENST00000336180 C1orf131Q8NDD1 294 aaKnown RBP13.45□□□□□ -0.26
LIMK1-201ENST00000336180 CGRRF1Q99675 332 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 SMARCAD1Q9H4L7 1026 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 MROH8Q9H579 483 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 CEP83Q9Y592 693 aa13.45□□□□□ -0.26
LIMK1-201ENST00000336180 ADGRA2Q96PE1 1338 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 ARID2Q68CP9 1835 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 CLTAP09496 248 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 CYP2B6P20813 491 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 ACO1P21399 889 aaKnown RBP13.44□□□□□ -0.26
LIMK1-201ENST00000336180 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
LIMK1-201ENST00000336180 RPL7AP62424 266 aaKnown RBP13.44□□□□□ -0.26
LIMK1-201ENST00000336180 IFT20Q8IY31 132 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 PBKQ96KB5 322 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 UBXN6Q9BZV1 441 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 CDT1Q9H211 546 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 ZC3H4Q9UPT8 1303 aaKnown RBP13.44□□□□□ -0.26
LIMK1-201ENST00000336180 BTNL10A8MVZ5 291 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 ATP1A2P50993 1020 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 WDR72Q3MJ13 1102 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 ACAD10Q6JQN1 1059 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 MAMDC4Q6UXC1 1216 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms