RNA–Protein interactions for RNA: ENST00000336053.10

HNRNPC-201, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 3,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-201ENST00000336053 CHRNB2P17787 502 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 NCOA4Q13772 614 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 PUM3Q15397 648 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 SLC45A4Q5BKX6 768 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 PPP1R2P3Q6NXS1 205 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 PAOXQ6QHF9 649 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 TREML1Q86YW5 311 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 OR6Y1Q8NGX8 325 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 C10orf82Q8WW14 230 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 CNBD2Q96M20 576 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 PRPF18Q99633 342 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 DNAJC12Q9UKB3 198 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 STXBP5LQ9Y2K9 1186 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 SFI1A8K8P3 1242 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 ECE2O60344 883 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 IFNB1P01574 187 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 GYS1P13807 737 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 LMNB1P20700 586 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 CASP4P49662 377 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 ATXN3P54252 364 aaPredicted RBP9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 ALDH18A1P54886 795 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 PDK3Q15120 406 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 PLEKHG4Q58EX7 1191 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 ANO5Q75V66 913 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 ADGRA1Q86SQ6 560 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 ZDHHC14Q8IZN3 488 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 GSTCDQ8NEC7 633 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 LNX1Q8TBB1 728 aaPredicted RBP9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 GIPC3Q8TF64 312 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 LZICQ8WZA0 190 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 HAPLN3Q96S86 360 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 RBM15Q96T37 977 aaKnown RBP eCLIP9.38□□□□□ -0.911e-17■■■■■ 48.5
HNRNPC-201ENST00000336053 C6orf50Q9HD87 102 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 MCM9Q9NXL9 1143 aa9.38□□□□□ -0.91
HNRNPC-201ENST00000336053 PDLIM1O00151 329 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 MEIS1O00470 390 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 XPO1O14980 1071 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 SPTLC1O15269 473 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 FOXD2O60548 495 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 MYL2P10916 166 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 GRIA2P42262 883 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 DRG2P55039 364 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 AQP4P55087 323 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 NOP14P78316 857 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 DMPKQ09013 629 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 CMPK2Q5EBM0 449 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 TMCO4Q5TGY1 634 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 TMEM53Q6P2H8 277 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 PROM2Q8N271 834 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 RAD54LQ92698 747 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 ART4Q93070 314 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 TMEM120AQ9BXJ8 343 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 SELENONQ9NZV5 590 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 HEY1Q9Y5J3 304 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 GMEB1Q9Y692 573 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 USP17L3A6NCW0 530 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 USP17L4A6NCW7 530 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 PHKG2P15735 406 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 HOXD12P35452 270 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 SEPT6Q14141 434 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 KLHL35Q6PF15 583 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 KLHDC10Q6PID8 442 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 USP17L1Q7RTZ2 530 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 TRMT1LQ7Z2T5 733 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 SLC13A5Q86YT5 568 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 ANKMY2Q8IV38 441 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 POU5F2Q8N7G0 328 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 FBXO27Q8NI29 283 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 DCUN1D5Q9BTE7 237 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 TMEM109Q9BVC6 243 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 TSSK1BQ9BXA7 367 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 TUT1Q9H6E5 874 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 IL1RAPL1Q9NZN1 696 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 PACSIN3Q9UKS6 424 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 COG5Q9UP83 839 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 WDR37Q9Y2I8 494 aa9.37□□□□□ -0.91
HNRNPC-201ENST00000336053 PNPLA7Q6ZV29 1317 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 FCHO1O14526 889 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 LDHAP00338 332 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 PABPC4LP0CB38 370 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 VCLP18206 1134 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 VCAM1P19320 739 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 NR1H3Q13133 447 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 PABPC4Q13310 644 aaKnown RBP eCLIP9.36□□□□□ -0.915e-22■□□□□ 10.5
HNRNPC-201ENST00000336053 MOGSQ13724 837 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 RASA3Q14644 834 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 RASA2Q15283 850 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 MAPK6Q16659 721 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 SFT2D3Q587I9 215 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 SYDE2Q5VT97 1194 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 SLFN11Q7Z7L1 901 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 ALYREFQ86V81 257 aaKnown RBP9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 TRIML2Q8N7C3 387 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 ATP11CQ8NB49 1132 aa9.36□□□□□ -0.91
HNRNPC-201ENST00000336053 AZIN2Q96A70 460 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms