RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 COLGALT1Q8NBJ5 622 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 ZNF516Q92618 1163 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 CLP1Q92989 425 aaKnown RBP15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 ANKRD36BP1Q96IX9 119 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 CNOT6LQ96LI5 555 aaKnown RBP15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 UROC1Q96N76 676 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 ZNF558Q96NG5 402 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 PAAF1Q9BRP4 392 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 MTMR12Q9C0I1 747 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 SLC28A3Q9HAS3 691 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 SAMSN1Q9NSI8 373 aaKnown RBP15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 DPP3Q9NY33 737 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 FAN1Q9Y2M0 1017 aa15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.24■□□□□ 0.03
APOBEC3B-202ENST00000335760 SMTNL1A8MU46 457 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 NT5C1B-RDH14C9J2C7 533 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 NRP1O14786 923 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 CAVIN2O95810 425 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 LINC00271P0C7V0 271 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 LRPAP1P30533 357 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 CTNNB1P35222 781 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 ALDH7A1P49419 539 aaKnown RBP15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 CLCNKBP51801 687 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 CLDN10P78369 228 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 ENPEPQ07075 957 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 NCAPHQ15003 741 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 C1orf220Q5T0J3 134 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 TCERG1LQ5VWI1 586 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 SPRED2Q7Z698 418 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 DHX40Q8IX18 779 aaKnown RBP15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 TGS1Q96RS0 853 aaKnown RBP15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 C17orf80Q9BSJ5 609 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 COLEC11Q9BWP8 271 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 CBX8Q9HC52 389 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 FANCLQ9NW38 375 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 MTUS1Q9ULD2 1270 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 PRG3Q9Y2Y8 225 aaPredicted RBP15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 RWDD3Q9Y3V2 267 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 PCDHB12Q9Y5F1 795 aa15.23■□□□□ 0.03
APOBEC3B-202ENST00000335760 NLRC5Q86WI3 1866 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 BECN2A8MW95 431 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 PODXLO00592 558 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 IKBKBO14920 756 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 RPL9P32969 192 aaKnown RBP15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 BMPR1AP36894 532 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 MTIF2P46199 727 aaKnown RBP15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 AP3M2P53677 418 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 MCCD1P59942 119 aaPredicted RBP15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 IQCB1Q15051 598 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 UPP1Q16831 310 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 TRAPPC11Q7Z392 1133 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 TRIM59Q8IWR1 403 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 C1orf127Q8N9H9 656 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 DDX27Q96GQ7 796 aaKnown RBP15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 SAMD11Q96NU1 681 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 MMRN2Q9H8L6 949 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 CERS4Q9HA82 394 aa15.22■□□□□ 0.03
APOBEC3B-202ENST00000335760 LAMA2P24043 3122 aaKnown RBP15.21■□□□□ 0.03
APOBEC3B-202ENST00000335760 KCNJ18B7U540 433 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 F8W810 466 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 SOX1O00570 391 aaPredicted RBP15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 STX10O60499 249 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 PHACTR2O75167 634 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 C4BPAP04003 597 aaKnown RBP15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 ITGB3P05106 788 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 KRT19P08727 400 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 GCLMP48507 274 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 ERVK-21P61565 698 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 PPP3CAQ08209 521 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 BIRC3Q13489 604 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 KCNJ12Q14500 433 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 EPC2Q52LR7 807 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 CDKAL1Q5VV42 579 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 C9orf57Q5W0N0 161 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 DCLRE1AQ6PJP8 1040 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 SLC39A11Q8N1S5 342 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 SPG21Q9NZD8 308 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 ITGA11Q9UKX5 1188 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 AGAP1Q9UPQ3 857 aa15.21■□□□□ 0.02
APOBEC3B-202ENST00000335760 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 CARNS1A5YM72 827 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 PIRO00625 290 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 PPEF2O14830 753 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 TADA2AO75478 443 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 B3GAT3O94766 335 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 KIF4AO95239 1232 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 IGFBP6P24592 240 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 POLR2BP30876 1174 aaKnown RBP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 GTF2H1P32780 548 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 RBP5P82980 135 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 TCP11X2Q5H9J9 407 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 TDRD10Q5VZ19 366 aaKnown RBP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 SCARA3Q6AZY7 606 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 SV2AQ7L0J3 742 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 LUZP1Q86V48 1076 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 TMEM173Q86WV6 379 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 KLHL23Q8NBE8 558 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms