RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 TBX20Q9UMR3 447 aa12.26□□□□□ -0.45
C9orf85-201ENST00000334731 TECTAO75443 2155 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 I3L4J1 428 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 PODXLO00592 558 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 TRAK2O60296 914 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 ZMYND10O75800 440 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 KRT18P05783 430 aaKnown RBP12.25□□□□□ -0.45
C9orf85-201ENST00000334731 SCP2P22307 547 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 RPL9P32969 192 aaKnown RBP12.25□□□□□ -0.45
C9orf85-201ENST00000334731 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
C9orf85-201ENST00000334731 MTMR3Q13615 1198 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 RAB33AQ14088 237 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 RSPO2Q6UXX9 243 aaPredicted RBP12.25□□□□□ -0.45
C9orf85-201ENST00000334731 FBXL6Q8N531 539 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
C9orf85-201ENST00000334731 CLIC6Q96NY7 704 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 FIZ1Q96SL8 496 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 SMOC2Q9H3U7 446 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 PIDD1Q9HB75 910 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 MTRRQ9UBK8 725 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 FBXW11Q9UKB1 542 aa12.25□□□□□ -0.45
C9orf85-201ENST00000334731 STX6O43752 255 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 CLUHO75153 1309 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 CLTAP09496 248 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 TKTP29401 623 aaKnown RBP12.24□□□□□ -0.45
C9orf85-201ENST00000334731 OR1D2P34982 312 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 LIG4P49917 911 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 EMP3P54852 163 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 SLC39A14Q15043 492 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 RRAGBQ5VZM2 374 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 STAMQ92783 540 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 SNX21Q969T3 373 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 BICD1Q96G01 975 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 USP28Q96RU2 1077 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 KCNH6Q9H252 994 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 ZHX3Q9H4I2 956 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 ZSCAN16Q9H4T2 348 aaPredicted RBP12.24□□□□□ -0.45
C9orf85-201ENST00000334731 PLEKHA5Q9HAU0 1116 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 KCNK12Q9HB15 430 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 BACE2Q9Y5Z0 518 aa12.24□□□□□ -0.45
C9orf85-201ENST00000334731 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
C9orf85-201ENST00000334731 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 TTC26A0AVF1 554 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 K7ENM7 598 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 HNRNPDLO14979 420 aaKnown RBP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 FAM189A1O60320 539 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 TBCAO75347 108 aaKnown RBP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 PDGFBP01127 241 aaPredicted RBP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 PIGRP01833 764 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 C8AP07357 584 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 HNRNPA1P09651 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 CXCL8P10145 99 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 NMT1P30419 496 aaKnown RBP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 TNFSF9P41273 254 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 MATR3P43243 847 aaKnown RBP eCLIP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 GTF2BQ00403 316 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 SPAG1Q07617 926 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 ZBTB6Q15916 424 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 ZBTB41Q5SVQ8 909 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 KRI1Q8N9T8 703 aaKnown RBP12.23□□□□□ -0.45
C9orf85-201ENST00000334731 MYADMQ96S97 322 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 KRTAP3-3Q9BYR6 98 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 KRTAP3-2Q9BYR7 98 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 STK17AQ9UEE5 414 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 CDY1Q9Y6F8 540 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 TRIOO75962 3097 aa12.23□□□□□ -0.45
C9orf85-201ENST00000334731 A0A0B4J269 797 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 MYMKA6NI61 221 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 LACTBL1A8MY62 500 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 SYN3O14994 580 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 OGTO15294 1046 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 TBC1D4O60343 1298 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 ADRB2P07550 413 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 HOXB1P14653 301 aaPredicted RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 GBP2P32456 591 aaPredicted RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 TDGQ13569 410 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 ENOX2Q16206 610 aaKnown RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 KYAT1Q16773 422 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 UVSSAQ2YD98 709 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 ZC2HC1CQ53FD0 456 aaPredicted RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 PPM1LQ5SGD2 360 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 AXDND1Q5T1B0 1012 aaPredicted RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 LIN9Q5TKA1 542 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 SLC8B1Q6J4K2 584 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 SLC39A4Q6P5W5 647 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 DYMQ7RTS9 669 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 ZNF720Q7Z2F6 126 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 MAP4K3Q8IVH8 894 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 SUGP1Q8IWZ8 645 aaKnown RBP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 TMEM130Q8N3G9 435 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 SUSD3Q96L08 255 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 ST6GALNAC4Q9H4F1 302 aa12.22□□□□□ -0.45
C9orf85-201ENST00000334731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
C9orf85-201ENST00000334731 IGSF9Q9P2J2 1179 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms