RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CBWD6Q4V339 395 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 DCAF17Q5H9S7 520 aaPredicted RBP18.92■□□□□ 0.62
CHGA-202ENST00000334654 CBWD3Q5JTY5 395 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 CBWD5Q5RIA9 395 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 TCERG1LQ5VWI1 586 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 TDRD10Q5VZ19 366 aaKnown RBP18.92■□□□□ 0.62
CHGA-202ENST00000334654 TRAPPC11Q7Z392 1133 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 YME1L1Q96TA2 773 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 PAAF1Q9BRP4 392 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 ZBED2Q9BTP6 218 aa18.92■□□□□ 0.62
CHGA-202ENST00000334654 MRPL9Q9BYD2 267 aaKnown RBP18.92■□□□□ 0.62
CHGA-202ENST00000334654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.92■□□□□ 0.62
CHGA-202ENST00000334654 CHD9Q3L8U1 2897 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 ANO9A1A5B4 782 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 GOLGA6L19H0YKK7 550 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 TULP1O00294 542 aaPredicted RBP18.91■□□□□ 0.62
CHGA-202ENST00000334654 TLL1O43897 1013 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 VNN1O95497 513 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 CST3P01034 146 aaPredicted RBP18.91■□□□□ 0.62
CHGA-202ENST00000334654 LRPAP1P30533 357 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 GTF2H1P32780 548 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 BTG3Q14201 252 aaPredicted RBP18.91■□□□□ 0.62
CHGA-202ENST00000334654 MAN2A1Q16706 1144 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 USP37Q86T82 979 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 LRRC43Q8N309 656 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 CACTINQ8WUQ7 758 aaKnown RBP18.91■□□□□ 0.62
CHGA-202ENST00000334654 SLC38A7Q9NVC3 462 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 DPP3Q9NY33 737 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 TAB2Q9NYJ8 693 aa18.91■□□□□ 0.62
CHGA-202ENST00000334654 MRPL42Q9Y6G3 142 aaKnown RBP18.91■□□□□ 0.62
CHGA-202ENST00000334654 PPEF2O14830 753 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 PMM2O15305 246 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 LRRN2O75325 713 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 ARHGEF15O94989 841 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 TMEM191BP0C7N4 346 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 MYOGP15173 224 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 CDK11BP21127 795 aaKnown RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 FMO5P49326 533 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 COPB1P53618 953 aaKnown RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 AP3M2P53677 418 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 CD300LGQ6UXG3 332 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 BEST2Q8NFU1 509 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 RABGGTAQ92696 567 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 ANKRD36BP1Q96IX9 119 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 VPS16Q9H269 839 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 NDST4Q9H3R1 872 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 TMEM8AQ9HCN3 771 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 COQ4Q9Y3A0 265 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 LAMA3Q16787 3333 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 CASTOR2A6NHX0 329 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 PIRO00625 290 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 XPOTO43592 962 aaKnown RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 AFPP02771 609 aaKnown RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 CLCNKBP51801 687 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 RNASELQ05823 741 aaKnown RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 UPP1Q16831 310 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 VWA3BQ502W6 1294 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 CLP1Q92989 425 aaKnown RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 MMRN2Q9H8L6 949 aa18.9■□□□□ 0.62
CHGA-202ENST00000334654 YBX2Q9Y2T7 364 aaKnown RBP18.9■□□□□ 0.62
CHGA-202ENST00000334654 TRIOBPQ9H2D6 2365 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 F8W810 466 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 AP5Z1O43299 807 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 STX10O60499 249 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 TNNC2P02585 160 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 ITGB3P05106 788 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 GALTP07902 379 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 PRKCSHP14314 528 aaPredicted RBP18.89■□□□□ 0.61
CHGA-202ENST00000334654 PBX2P40425 430 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 SLC11A1P49279 550 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 C9orf57Q5W0N0 161 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 KRT39Q6A163 491 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 C3orf58Q8NDZ4 430 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 TAS1R2Q8TE23 839 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 SEMA4DQ92854 862 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 NAP1L5Q96NT1 182 aaPredicted RBP18.89■□□□□ 0.61
CHGA-202ENST00000334654 ITGA11Q9UKX5 1188 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 PCDHA11Q9Y5I1 949 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 NLRC5Q86WI3 1866 aa18.89■□□□□ 0.61
CHGA-202ENST00000334654 ZC3H11AO75152 810 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHGA-202ENST00000334654 RPL9P32969 192 aaKnown RBP18.88■□□□□ 0.61
CHGA-202ENST00000334654 PBX3P40426 434 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 MXI1P50539 228 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 TPM4P67936 248 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 FANCCQ00597 558 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 EPC2Q52LR7 807 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 SPRED2Q7Z698 418 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 FIBCD1Q8N539 461 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 LMO3Q8TAP4 145 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 TMEM175Q9BSA9 504 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 PBX4Q9BYU1 374 aa18.88■□□□□ 0.61
CHGA-202ENST00000334654 COLQQ9Y215 455 aaPredicted RBP18.88■□□□□ 0.61
CHGA-202ENST00000334654 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.88■□□□□ 0.61
CHGA-202ENST00000334654 A0A1B0GTH6 734 aa18.87■□□□□ 0.61
CHGA-202ENST00000334654 LINC01553A4QN01 128 aa18.87■□□□□ 0.61
CHGA-202ENST00000334654 PODXLO00592 558 aa18.87■□□□□ 0.61
CHGA-202ENST00000334654 NRP1O14786 923 aa18.87■□□□□ 0.61
CHGA-202ENST00000334654 P4HA2O15460 535 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms