RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TRIM63Q969Q1 353 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 LRRC39Q96DD0 335 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PHTF1Q9UMS5 762 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 KIF21AQ7Z4S6 1674 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 CLRN2A0PK11 232 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 SPDYE5A6NIY4 337 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PDZK1P1A8MUH7 402 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 AP1G2O75843 785 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 CIITAP33076 1130 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 SPDYE7PQ495Y7 208 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 TTC39BQ5VTQ0 682 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 SH3BP5LQ7L8J4 393 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 ISCUQ9H1K1 167 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PARVAQ9NVD7 372 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PNMA6FA0A0J9YX94 578 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 ZBTB39O15060 712 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 TRIM24O15164 1050 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 RTN2O75298 545 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 GDF11O95390 407 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 WEE2P0C1S8 567 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 C4BPBP20851 252 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 STXBP2Q15833 593 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 INAQ16352 499 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 AASDHQ4L235 1098 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 MEI1Q5TIA1 1274 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 KIAA1841Q6NSI8 718 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 E2F7Q96AV8 911 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PLEKHA8Q96JA3 519 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 SMAD5Q99717 465 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 MOV10L1Q9BXT6 1211 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 CELF4Q9BZC1 486 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 HSD17B3P37058 310 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 NME3Q13232 169 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 TP53BP2Q13625 1128 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 SHC4Q6S5L8 630 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 JAMLQ86YT9 394 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 ST13P5Q8NFI4 369 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 MIEF2Q96C03 454 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 ZC3H7BQ9UGR2 993 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PRDM4Q9UKN5 801 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 MYOM2P54296 1465 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 MYO3BQ8WXR4 1341 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 NFKBIAP25963 317 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 SERPINB8P50452 374 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 ACTR2P61160 394 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 R3HDM1Q15032 1099 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 CENPPQ6IPU0 288 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 FGD2Q7Z6J4 655 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PRUNE1Q86TP1 453 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 NLRP10Q86W26 655 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PNKPQ96T60 521 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 TPST1O60507 370 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 USP17L8P0C7I0 530 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 FCER1AP12319 257 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SERPINB9P50453 376 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 LPCAT2Q7L5N7 544 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 PID1Q7Z2X4 250 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 C11orf74Q86VG3 221 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SCUBE1Q8IWY4 988 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 BBS7Q8IWZ6 715 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 C3orf20Q8ND61 904 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 WNK4Q96J92 1243 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 NLRP4Q96MN2 994 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 DDX18Q9NVP1 670 aaKnown RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 HEY2Q9UBP5 337 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 FHOD1Q9Y613 1164 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 A0A1B0GTH6 734 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SLC16A4O15374 487 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 MAGEA4P43358 317 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 ARHGEF6Q15052 776 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 KIZQ2M2Z5 673 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 KDELC2Q7Z4H8 507 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SIX5Q8N196 739 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 CCDC17Q96LX7 622 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 TPD52L2O43399 206 aaKnown RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 BMP3P12645 472 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 LAMC2Q13753 1193 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 ANKRD40Q6AI12 368 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SIRT2Q8IXJ6 389 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 RCOR2Q8IZ40 523 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 DIS3LQ8TF46 1054 aaKnown RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SPATA2Q9UM82 520 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 CDHR2Q9BYE9 1310 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 ATP10DQ9P241 1426 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 KPNA4O00629 521 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 GUCA1CO95843 209 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 AKR1B1P15121 316 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SLC1A1P43005 524 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 PSMC6P62333 389 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 RAD9BQ6WBX8 426 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 CYFIP1Q7L576 1253 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SETD3Q86TU7 594 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 MFN1Q8IWA4 741 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 MMGT1Q8N4V1 131 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 HNRNPLLQ8WVV9 542 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms