RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CD58P19256 250 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 CORO7P57737 925 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 SGO2Q562F6 1265 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 GADL1Q6ZQY3 521 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 LRRC71Q8N4P6 559 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 PWWP2AQ96N64 755 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 PCDHB2Q9Y5E7 798 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 SSC5DA1L4H1 1573 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 GSTTP1A0A1W2PQM5 241 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 GJB1P08034 283 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 ALDH5A1P51649 535 aaPredicted RBP20.21■□□□□ 0.83
RFTN1-201ENST00000334133 OSTNP61366 133 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 TCEAL1Q15170 157 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 NLRP14Q86W24 1093 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 ZNF473Q8WTR7 871 aaKnown RBP20.21■□□□□ 0.83
RFTN1-201ENST00000334133 DHX33Q9H6R0 707 aaKnown RBP20.21■□□□□ 0.83
RFTN1-201ENST00000334133 PCYOX1Q9UHG3 505 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 R3HDM2Q9Y2K5 976 aaKnown RBP20.21■□□□□ 0.83
RFTN1-201ENST00000334133 USP2O75604 605 aaPredicted RBP20.21■□□□□ 0.83
RFTN1-201ENST00000334133 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
RFTN1-201ENST00000334133 CAPSQ13938 189 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 DENND2CQ68D51 928 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 MMS22LQ6ZRQ5 1243 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 GPRC5DQ9NZD1 345 aa20.21■□□□□ 0.83
RFTN1-201ENST00000334133 GNA15P30679 374 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 PPP2R2AP63151 447 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 IFI35P80217 286 aaPredicted RBP20.2■□□□□ 0.82
RFTN1-201ENST00000334133 CUL2Q13617 745 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 PPP2R5EQ16537 467 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 MYCBPAPQ8TBZ2 947 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 EPS8L3Q8TE67 593 aaKnown RBP20.2■□□□□ 0.82
RFTN1-201ENST00000334133 PABPC3Q9H361 631 aaKnown RBP20.2■□□□□ 0.82
RFTN1-201ENST00000334133 SLC12A6Q9UHW9 1150 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 THAP12O43422 761 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 RTP1P59025 263 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 CCDC38Q502W7 563 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 MOB2Q70IA6 237 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 PRPF31Q8WWY3 499 aaKnown RBP20.2■□□□□ 0.82
RFTN1-201ENST00000334133 AZI2Q9H6S1 392 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 ASIC3Q9UHC3 531 aa20.2■□□□□ 0.82
RFTN1-201ENST00000334133 SOWAHBA6NEL2 793 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ACO1P21399 889 aaKnown RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 TCF7P36402 384 aaPredicted RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 NOP14P78316 857 aaKnown RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 KRT17Q04695 432 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ATP13A4Q4VNC1 1196 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ZFYVE27Q5T4F4 411 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 TRAPPC12Q8WVT3 735 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 CCDC114Q96M63 670 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 CENPFP49454 3210 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 FOXO6A8MYZ6 492 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ATP2A1O14983 1001 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 FARP2O94887 1054 aaPredicted RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ECEL1O95672 775 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 GGPS1O95749 300 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ARL2P36404 184 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 STAT5BP51692 787 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 TAS2R40P59535 323 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 RBBP8NLQ8NC74 664 aaPredicted RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 BBXQ8WY36 941 aaPredicted RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 SELENOSQ9BQE4 189 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 DDX23Q9BUQ8 820 aaKnown RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 MTFR1LQ9H019 292 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 CCDC113Q9H0I3 377 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ADAM22Q9P0K1 906 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ADM5C9JUS6 153 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 HSPA6P17066 643 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 NAMPTP43490 491 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 WDR78Q5VTH9 848 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 SCARA5Q6ZMJ2 495 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ANKS1BQ7Z6G8 1248 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 ACSF2Q96CM8 615 aaPredicted RBP20.19■□□□□ 0.82
RFTN1-201ENST00000334133 CEP89Q96ST8 783 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 LCTP09848 1927 aa20.19■□□□□ 0.82
RFTN1-201ENST00000334133 PI4K2BG5E9Z4 385 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 ACSL3O95573 720 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 TCF4P15884 667 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 QPCTQ16769 361 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 MICALL1Q8N3F8 863 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 OTUD5Q96G74 571 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 PODXLO00592 558 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 RALAP11233 206 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 NCOA4Q13772 614 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 MTMR12Q9C0I1 747 aa20.18■□□□□ 0.82
RFTN1-201ENST00000334133 A0A0B4J269 797 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 ARIH2O95376 493 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 RPL7AP62424 266 aaKnown RBP20.17■□□□□ 0.82
RFTN1-201ENST00000334133 ENOSF1Q7L5Y1 443 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 ARFGAP2Q8N6H7 521 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 PPP1R16BQ96T49 567 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.17■□□□□ 0.82
RFTN1-201ENST00000334133 MTRF1LQ9UGC7 380 aaKnown RBP20.17■□□□□ 0.82
RFTN1-201ENST00000334133 CD2APQ9Y5K6 639 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 CHKAP35790 457 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 HSDL1Q3SXM5 330 aa20.17■□□□□ 0.82
RFTN1-201ENST00000334133 MON1BQ7L1V2 547 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms