RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 IL9P15248 144 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 RAB27AP51159 221 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 ASIC1P78348 528 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 UBE3AQ05086 875 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 MAP9Q49MG5 647 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 CENPPQ6IPU0 288 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 WDR93Q6P2C0 686 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 CATSPER3Q86XQ3 398 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 ERMNQ8TAM6 284 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 ASAP3Q8TDY4 903 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 PSD3Q9NYI0 1048 aa12.02□□□□□ -0.48
APOBEC3B-201ENST00000333467 TRIP11Q15643 1979 aa12.02□□□□□ -0.49
APOBEC3B-201ENST00000333467 TARSL2A2RTX5 802 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 LINC01565O15544 149 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 ERLIN2O94905 339 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 SKIP12755 728 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 TRIM21P19474 475 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PPM1AP35813 382 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 LTBRP36941 435 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 AMPD2Q01433 879 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 DLX2Q07687 328 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 TFDP1Q14186 410 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 MXD4Q14582 209 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 LONRF2Q1L5Z9 754 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 CTC1Q2NKJ3 1217 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PAPD7Q5XG87 772 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 HAUS3Q68CZ6 603 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 KCNT2Q6UVM3 1135 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 GUF1Q8N442 669 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 ACRBPQ8NEB7 543 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PPP2R3CQ969Q6 453 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 CDK5RAP3Q96JB5 506 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 CNOT6LQ96LI5 555 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 ZNF558Q96NG5 402 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 POLR3CQ9BUI4 534 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 FUT8Q9BYC5 575 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 POLR3FQ9H1D9 316 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 IGFLR1Q9H665 355 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 INPP5FQ9Y2H2 1132 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PLXNA3P51805 1871 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PDCD11Q14690 1871 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 DENND4AQ7Z401 1863 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 INO80B-WBP1J3KQ70 363 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 ASAP2O43150 1006 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 NCK2O43639 380 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 TSPAN1O60635 241 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 ZC3H11AO75152 810 aaKnown RBP eCLIP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 GLRA2P23416 452 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 RPA1P27694 616 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 MTIF2P46199 727 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 NRIP1P48552 1158 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PTENP60484 403 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 MBTD1Q05BQ5 628 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 ITIH3Q06033 890 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 CLUL1Q15846 466 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PLPP4Q5VZY2 271 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 GLB1LQ6UWU2 654 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 TRAPPC11Q7Z392 1133 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 DUSP9Q99956 384 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 GPRC5CQ9NQ84 441 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 CALCOCO1Q9P1Z2 691 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 DBR1Q9UK59 544 aaKnown RBP12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 PCDHB2Q9Y5E7 798 aa12.01□□□□□ -0.49
APOBEC3B-201ENST00000333467 ZNF623O75123 536 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 GLP2RO95838 553 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 HOXA11P31270 313 aaPredicted RBP12□□□□□ -0.49
APOBEC3B-201ENST00000333467 ARL2P36404 184 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 NDUFV1P49821 464 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 ERVFC1P60507 584 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 PLCB3Q01970 1234 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 MAN2A1Q16706 1144 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 UBXN11Q5T124 520 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 KRT79Q5XKE5 535 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 CCDC70Q6NSX1 233 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 MAEAQ7L5Y9 396 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 KIAA1328Q86T90 577 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 RBM23Q86U06 439 aaKnown RBP12□□□□□ -0.49
APOBEC3B-201ENST00000333467 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
APOBEC3B-201ENST00000333467 SLC39A11Q8N1S5 342 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 LARP4BQ92615 738 aaKnown RBP12□□□□□ -0.49
APOBEC3B-201ENST00000333467 CPB2Q96IY4 423 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 NACC1Q96RE7 527 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 TSG101Q99816 390 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 TCF25Q9BQ70 676 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 ANKZF1Q9H8Y5 726 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 ENTPD7Q9NQZ7 604 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 TBC1D13Q9NVG8 400 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 LZTS1Q9Y250 596 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 SAR1BQ9Y6B6 198 aa12□□□□□ -0.49
APOBEC3B-201ENST00000333467 C2orf16Q68DN1 1984 aa11.99□□□□□ -0.49
APOBEC3B-201ENST00000333467 CITO14578 2027 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms