RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 NOD2Q9HC29 1040 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 TMEM8AQ9HCN3 771 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
VPS33B-201ENST00000333371 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
VPS33B-201ENST00000333371 EGFRP00533 1210 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
VPS33B-201ENST00000333371 RALAP11233 206 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 ADCY8P40145 1251 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 GPC3P51654 580 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
VPS33B-201ENST00000333371 MAP3K10Q02779 954 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 CXorf56Q9H5V9 222 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 CCDC134Q9H6E4 229 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 NINJ2Q9NZG7 142 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 USTQ9Y2C2 406 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 A8MUI8 341 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 NFKBIEO00221 500 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 WDR46O15213 610 aaKnown RBP13.13□□□□□ -0.31
VPS33B-201ENST00000333371 THAP12O43422 761 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 BRAFP15056 766 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 RPS12P25398 132 aaKnown RBP13.13□□□□□ -0.31
VPS33B-201ENST00000333371 GBP1P32455 592 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 TAS2R40P59535 323 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 ALCAMQ13740 583 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 TRMT10CQ7L0Y3 403 aaKnown RBP13.13□□□□□ -0.31
VPS33B-201ENST00000333371 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 SRRM1Q8IYB3 904 aaKnown RBP13.13□□□□□ -0.31
VPS33B-201ENST00000333371 MCOLN2Q8IZK6 566 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 ZNF516Q92618 1163 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 SNF8Q96H20 258 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 RUNDC3BQ96NL0 473 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 DCLK3Q9C098 648 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 KMT5AQ9NQR1 393 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
VPS33B-201ENST00000333371 WHRNQ9P202 907 aa13.13□□□□□ -0.31
VPS33B-201ENST00000333371 TTC4O95801 387 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 UNGP13051 313 aaPredicted RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 CD58P19256 250 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 NF2P35240 595 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 SSR1P43307 286 aaKnown RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 CYP24A1Q07973 514 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 MYPNQ86TC9 1320 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 GLIS1Q8NBF1 620 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 LPAR1Q92633 364 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 C11orf70Q9BRQ4 267 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 TCEAL9Q9UHQ7 104 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 ANAPC5Q9UJX4 755 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 HNRNPDLO14979 420 aaKnown RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 OAS1P00973 400 aaKnown RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 TCF4P15884 667 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 ZNF280AP59817 542 aaPredicted RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 NCALDP61601 193 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 PGM5Q15124 567 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 CAPN12Q6ZSI9 719 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 P3H4Q92791 437 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 VTI1AQ96AJ9 217 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 RMDN2Q96LZ7 410 aa13.12□□□□□ -0.31
VPS33B-201ENST00000333371 USP15Q9Y4E8 981 aaPredicted RBP13.12□□□□□ -0.31
VPS33B-201ENST00000333371 PI4K2BG5E9Z4 385 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 ATF2P15336 505 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 DMP1Q13316 513 aaPredicted RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 CGB2Q6NT52 195 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 STMN4Q9H169 189 aaPredicted RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 ZNF862O60290 1169 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 ITIH2P19823 946 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 DSG3P32926 999 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 PSMC5P62195 406 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 PTK6Q13882 451 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 FAM47EQ6ZV65 393 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 C4orf19Q8IY42 314 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 MRRFQ96E11 262 aaKnown RBP13.11□□□□□ -0.31
VPS33B-201ENST00000333371 STAMBPL1Q96FJ0 436 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 BICD1Q96G01 975 aa13.11□□□□□ -0.31
VPS33B-201ENST00000333371 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms