RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 IRF2BP1Q8IU81 584 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 BEST2Q8NFU1 509 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 OR5B17Q8NGF7 314 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 CXorf38Q8TB03 319 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 ENOX1Q8TC92 643 aaKnown RBP17.37■□□□□ 0.37
LRRC28-202ENST00000331450 BCL7CQ8WUZ0 217 aaPredicted RBP17.37■□□□□ 0.37
LRRC28-202ENST00000331450 ZNF516Q92618 1163 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 CCDC127Q96BQ5 260 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 FAM84AQ96KN4 292 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 SRRTQ9BXP5 876 aaKnown RBP17.37■□□□□ 0.37
LRRC28-202ENST00000331450 TTYH1Q9H313 450 aaPredicted RBP17.37■□□□□ 0.37
LRRC28-202ENST00000331450 PCDHB12Q9Y5F1 795 aa17.37■□□□□ 0.37
LRRC28-202ENST00000331450 ANO9A1A5B4 782 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 NT5C1B-RDH14C9J2C7 533 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 F8W810 466 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 RB1P06400 928 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 DLATP10515 647 aaKnown RBP17.36■□□□□ 0.37
LRRC28-202ENST00000331450 RPL9P32969 192 aaKnown RBP17.36■□□□□ 0.37
LRRC28-202ENST00000331450 PPM1AP35813 382 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 OR1G1P47890 313 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 ALDH7A1P49419 539 aaKnown RBP17.36■□□□□ 0.37
LRRC28-202ENST00000331450 CLCNKBP51801 687 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 VAMP7P51809 220 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 GUCY2FP51841 1108 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 TFAMQ00059 246 aaKnown RBP17.36■□□□□ 0.37
LRRC28-202ENST00000331450 LMBRD2Q68DH5 695 aaPredicted RBP17.36■□□□□ 0.37
LRRC28-202ENST00000331450 CD300LGQ6UXG3 332 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 C1orf127Q8N9H9 656 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 C3orf58Q8NDZ4 430 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 DDX27Q96GQ7 796 aaKnown RBP17.36■□□□□ 0.37
LRRC28-202ENST00000331450 FNBP1Q96RU3 617 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 POP1Q99575 1024 aaKnown RBP17.36■□□□□ 0.37
LRRC28-202ENST00000331450 BPIFA3Q9BQP9 254 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 MTMR12Q9C0I1 747 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 DPP3Q9NY33 737 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 SPG21Q9NZD8 308 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 MTUS1Q9ULD2 1270 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
LRRC28-202ENST00000331450 EPOPA6NHQ4 379 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 IKBKBO14920 756 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 KIF4AO95239 1232 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 ALDH2P05091 517 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 ITGB1P05556 798 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 TMEM191BP0C7N4 346 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 KRT13P13646 458 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 IGFBP6P24592 240 aaPredicted RBP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 FXR1P51114 621 aaKnown RBP eCLIP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 PLCB3Q01970 1234 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 FRMD5Q7Z6J6 570 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 RNF168Q8IYW5 571 aaPredicted RBP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 KLHL23Q8NBE8 558 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 FBXO22Q8NEZ5 403 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 CACTINQ8WUQ7 758 aaKnown RBP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 RABGGTAQ92696 567 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 IGSF21Q96ID5 467 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 C11orf84Q9BUA3 381 aaPredicted RBP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 THAP9Q9H5L6 903 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 CERS4Q9HA82 394 aa17.35■□□□□ 0.37
LRRC28-202ENST00000331450 METTL14Q9HCE5 456 aaKnown RBP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 ARMCX3Q9UH62 379 aaPredicted RBP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 PRG3Q9Y2Y8 225 aaPredicted RBP17.35■□□□□ 0.37
LRRC28-202ENST00000331450 H3BNC9 293 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 PODXLO00592 558 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 PIRO00625 290 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 PPEF2O14830 753 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 TRANK1O15050 2925 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 FGF18O76093 207 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 FGFR1OPO95684 399 aaKnown RBP17.34■□□□□ 0.37
LRRC28-202ENST00000331450 GNA14O95837 355 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 TRIM49P0CI25 452 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 TRIM49CP0CI26 452 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 TNNI1P19237 187 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 MYL5Q02045 173 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 NCAPHQ15003 741 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 DUOXA2Q1HG44 320 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 C9orf57Q5W0N0 161 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 SCARA3Q6AZY7 606 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 DCLRE1AQ6PJP8 1040 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 C15orf39Q6ZRI6 1047 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 USP37Q86T82 979 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 TRIM59Q8IWR1 403 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 ARNTL2Q8WYA1 636 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 SLC35C1Q96A29 364 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 ANKRD36BP1Q96IX9 119 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 CNOT6LQ96LI5 555 aaKnown RBP17.34■□□□□ 0.37
LRRC28-202ENST00000331450 COLEC11Q9BWP8 271 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 VN1R3Q9BXE9 311 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 SIX4Q9UIU6 781 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 ADAM28Q9UKQ2 775 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 ITGA11Q9UKX5 1188 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 NFE2L3Q9Y4A8 694 aa17.34■□□□□ 0.37
LRRC28-202ENST00000331450 TNNC2P02585 160 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 C4BPAP04003 597 aaKnown RBP17.33■□□□□ 0.36
LRRC28-202ENST00000331450 ITGB3P05106 788 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 AARSP49588 968 aaKnown RBP eCLIP17.33■□□□□ 0.36
LRRC28-202ENST00000331450 AP3M2P53677 418 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 PPP3CAQ08209 521 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 ZACNQ401N2 412 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 CCDC40Q4G0X9 1142 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms