RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PCDHB4Q9Y5E5 795 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 ZEB2O60315 1214 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 LDHAP00338 332 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 RPL21P46778 160 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 NOP14P78316 857 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 FAM160B1Q5W0V3 765 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 METTL7BQ6UX53 244 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 MOB2Q70IA6 237 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 SULF1Q8IWU6 871 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 BCAS4Q8TDM0 211 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 SEPT1Q8WYJ6 367 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 KCNN1Q92952 543 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 CGRRF1Q99675 332 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 PCNTO95613 3336 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 PPFIA2O75334 1257 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 CYP1A1P04798 512 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 ILDR2Q71H61 639 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 ZNF677Q86XU0 584 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 CCDC105Q8IYK2 499 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 C1orf131Q8NDD1 294 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 C11orf70Q9BRQ4 267 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 TXLNGYQ9BZA5 131 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 ASCC2Q9H1I8 757 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 TMEM134Q9H6X4 195 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 GRHL1Q9NZI5 618 aa15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 BCCIPQ9P287 314 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLCNKA-201ENST00000331433 MAFO75444 373 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 CNMDO75829 334 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 CLTAP09496 248 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 SRGAP2CP0DJJ0 459 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 GNA15P30679 374 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 COILP38432 576 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 BPIFB4P59827 614 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 CENPCQ03188 943 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 HSDL1Q3SXM5 330 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 LRRC71Q8N4P6 559 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 DCPSQ96C86 337 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 TXNRD2Q9NNW7 524 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 MTUS1Q9ULD2 1270 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 DICER1Q9UPY3 1922 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 A0A0G2JLL6 359 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 CCT5P48643 541 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 NCOA4Q13772 614 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 MON1BQ7L1V2 547 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 PRRT2Q7Z6L0 340 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 SRLQ86TD4 932 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 RBBP8NLQ8NC74 664 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 C1orf54Q8WWF1 131 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 ZNF668Q96K58 619 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 TCHPQ9BT92 498 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 AZI2Q9H6S1 392 aa15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 AVENQ9NQS1 362 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 RRP15Q9Y3B9 282 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-201ENST00000331433 DRG2P55039 364 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 CYP1B1Q16678 543 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 FAM212AQ96EL1 285 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 FGD4Q96M96 766 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 EPB41L4BQ9H329 900 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 MCM3APO60318 1980 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 ANKRD65E5RJM6 399 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 O00370 1275 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 SOCS7O14512 581 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 MSCO60682 206 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 CST3P01034 146 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 TGFB3P10600 412 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 IREB2P48200 963 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 Q3C1V9 767 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 KRT71Q3SY84 523 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 ABRAQ8N0Z2 381 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 HERPUD2Q9BSE4 406 aa15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 ADARB2Q9NS39 739 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-201ENST00000331433 PAPPA2Q9BXP8 1791 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 DCDC2CA8MYV0 355 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 PODXLO00592 558 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 THAP12O43422 761 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 FAM189A1O60320 539 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 ERLIN2O94905 339 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 GJB6O95452 261 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 MYBL1P10243 752 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 NOMO3P69849 1222 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 LAMTOR4Q0VGL1 99 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 TMEM63BQ5T3F8 832 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 UBAP2Q5T6F2 1119 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 EMC10Q5UCC4 262 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 RUFY4Q6ZNE9 571 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 BRSK2Q8IWQ3 736 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 RNF149Q8NC42 400 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 GPR20Q99678 358 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 MTMR12Q9C0I1 747 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 ADAM22Q9P0K1 906 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 LRRC37A2A6NM11 1700 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 ZBTB42B2RXF5 422 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 SHBGP04278 402 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 GJB1P08034 283 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 LSP1P33241 339 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 NF2P35240 595 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 PMS2P54278 862 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 IFFO1Q0D2I5 559 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 SNX1Q13596 522 aa15.85■□□□□ 0.13
CLCNKA-201ENST00000331433 ZPBP2Q6X784 338 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms