RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 GRID1Q9ULK0 1009 aa25.81■■□□□ 1.72
SOX1-201ENST00000330949 BMT2Q1RMZ1 405 aa25.81■■□□□ 1.72
SOX1-201ENST00000330949 COA7Q96BR5 231 aa25.81■■□□□ 1.72
SOX1-201ENST00000330949 TTC25Q96NG3 672 aa25.81■■□□□ 1.72
SOX1-201ENST00000330949 APEX2Q9UBZ4 518 aa25.81■■□□□ 1.72
SOX1-201ENST00000330949 MTA2O94776 668 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 CA4P22748 312 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 ADCY8P40145 1251 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 FMO5P49326 533 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 RBM17Q96I25 401 aaKnown RBP25.8■■□□□ 1.72
SOX1-201ENST00000330949 LBHD1Q9BQE6 289 aaPredicted RBP25.8■■□□□ 1.72
SOX1-201ENST00000330949 EXOC1LA0A1B0GW35 172 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 CFAP69A5D8W1 941 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 FSCN2O14926 492 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 THOC5Q13769 683 aaKnown RBP25.8■■□□□ 1.72
SOX1-201ENST00000330949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.8■■□□□ 1.72
SOX1-201ENST00000330949 ARL8BQ9NVJ2 186 aa25.8■■□□□ 1.72
SOX1-201ENST00000330949 RAD21O60216 631 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 PABPC4LP0CB38 370 aaKnown RBP25.79■■□□□ 1.72
SOX1-201ENST00000330949 IZUMO2Q6UXV1 221 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 FAM186BQ8IYM0 893 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 BBOF1Q8ND07 529 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 ZNF75CPQ92670 426 aaPredicted RBP25.79■■□□□ 1.72
SOX1-201ENST00000330949 CLIC2O15247 247 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 CCDC166P0CW27 439 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 RPA3P35244 121 aaPredicted RBP25.79■■□□□ 1.72
SOX1-201ENST00000330949 PSMC2P35998 433 aaKnown RBP25.79■■□□□ 1.72
SOX1-201ENST00000330949 BTDP43251 543 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 USP46P62068 366 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 PICALMQ13492 652 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 C9orf72Q96LT7 481 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 NYXQ9GZU5 481 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 WASF2Q9Y6W5 498 aa25.79■■□□□ 1.72
SOX1-201ENST00000330949 CLDN3O15551 220 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 PFDN1O60925 122 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 TMCC1O94876 653 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 KRT15P19012 456 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 CETN2P41208 172 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 ARHGAP44Q17R89 818 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 TDRPQ86YL5 185 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 ZNF526Q8TF50 670 aaPredicted RBP25.78■■□□□ 1.72
SOX1-201ENST00000330949 CFAP57Q96MR6 1250 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 USP17L5A8MUK1 530 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 F8W8V4 182 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 NAT14Q8WUY8 206 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 PPP2R3CQ969Q6 453 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 CEP95Q96GE4 821 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 ECSITQ9BQ95 431 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 RIOX1Q9H6W3 641 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 NARFQ9UHQ1 456 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 RFX1P22670 979 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 CDK8P49336 464 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 PLEKHG4Q58EX7 1191 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 CCDC62Q6P9F0 684 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 CCDC174Q6PII3 467 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 LRRC47Q8N1G4 583 aaKnown RBP25.78■■□□□ 1.72
SOX1-201ENST00000330949 ARHGEF1Q92888 912 aaKnown RBP25.78■■□□□ 1.72
SOX1-201ENST00000330949 INTS2Q9H0H0 1204 aaKnown RBP25.78■■□□□ 1.72
SOX1-201ENST00000330949 KIAA1586Q9HCI6 787 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 STK32BQ9NY57 414 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 NUMBLQ9Y6R0 609 aa25.78■■□□□ 1.72
SOX1-201ENST00000330949 ASLP04424 464 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 ETS2P15036 469 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 TRIP13Q15645 432 aaPredicted RBP25.77■■□□□ 1.72
SOX1-201ENST00000330949 DYDC2Q96IM9 177 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 FNBP1Q96RU3 617 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 REEP2Q9BRK0 252 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 TAS2R1Q9NYW7 299 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 ZNF510Q9Y2H8 683 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 SLURP2P0DP57 97 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 SPATA24Q86W54 205 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 PWWP2AQ96N64 755 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 ZNF287Q9HBT7 754 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 DCTN4Q9UJW0 460 aa25.77■■□□□ 1.72
SOX1-201ENST00000330949 CRABP2P29373 138 aa25.76■■□□□ 1.71
SOX1-201ENST00000330949 SLC1A5Q15758 541 aa25.76■■□□□ 1.71
SOX1-201ENST00000330949 PRUNE1Q86TP1 453 aa25.76■■□□□ 1.71
SOX1-201ENST00000330949 SLC20A1Q8WUM9 679 aa25.76■■□□□ 1.71
SOX1-201ENST00000330949 LENG1Q96BZ8 264 aaPredicted RBP25.76■■□□□ 1.71
SOX1-201ENST00000330949 C1QTNF12Q5T7M4 302 aa25.76■■□□□ 1.71
SOX1-201ENST00000330949 SYT2Q8N9I0 419 aaPredicted RBP25.76■■□□□ 1.71
SOX1-201ENST00000330949 NAP1L4Q99733 375 aaKnown RBP25.76■■□□□ 1.71
SOX1-201ENST00000330949 HEY2Q9UBP5 337 aa25.76■■□□□ 1.71
SOX1-201ENST00000330949 DNAJB4Q9UDY4 337 aa25.76■■□□□ 1.71
SOX1-201ENST00000330949 LAMB2P55268 1798 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 LRRN2O75325 713 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 ESRRAP11474 423 aaPredicted RBP25.75■■□□□ 1.71
SOX1-201ENST00000330949 PPP2R5CQ13362 524 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 C4orf33Q8N1A6 199 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 GPCPD1Q9NPB8 672 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 CHST7Q9NS84 486 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 FOXN3O00409 490 aaPredicted RBP25.75■■□□□ 1.71
SOX1-201ENST00000330949 DNAJC6O75061 913 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 ATP6V1G1O75348 118 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 GCNT3O95395 438 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 BCRP11274 1271 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 ANPEPP15144 967 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 RFC4P35249 363 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 RAP1GDS1P52306 607 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 INHBCP55103 352 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms