RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CYP4A11Q02928 519 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 TFF2Q03403 129 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 KRT17Q04695 432 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 COASYQ13057 564 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 CUL4AQ13619 759 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 PPP2R5AQ15172 486 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 PAN2Q504Q3 1202 aaKnown RBP7.01□□□□□ -1.29
SMG1-201ENST00000330588 CLLU1OSQ5K130 101 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 HYIQ5T013 277 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 TWF2Q6IBS0 349 aaKnown RBP7.01□□□□□ -1.29
SMG1-201ENST00000330588 KCNT2Q6UVM3 1135 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 GLB1LQ6UWU2 654 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 TRMT1LQ7Z2T5 733 aaKnown RBP7.01□□□□□ -1.29
SMG1-201ENST00000330588 BRAPQ7Z569 592 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 CATSPER3Q86XQ3 398 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 HACE1Q8IYU2 909 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 SLC39A11Q8N1S5 342 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 RNF149Q8NC42 400 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 POF1BQ8WVV4 589 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 KCNN1Q92952 543 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 PPP1R16BQ96T49 567 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 TMEM175Q9BSA9 504 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 TLR9Q9NR96 1032 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 TYW1Q9NV66 732 aaKnown RBP7.01□□□□□ -1.29
SMG1-201ENST00000330588 KCNG1Q9UIX4 513 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 PIN4Q9Y237 131 aaKnown RBP7.01□□□□□ -1.29
SMG1-201ENST00000330588 MORC2Q9Y6X9 1032 aaPredicted RBP7.01□□□□□ -1.29
SMG1-201ENST00000330588 PRRC2BQ5JSZ5 2229 aaKnown RBP7.01□□□□□ -1.29
SMG1-201ENST00000330588 MED24O75448 989 aa7□□□□□ -1.29
SMG1-201ENST00000330588 FGFR1P11362 822 aa7□□□□□ -1.29
SMG1-201ENST00000330588 CYP11B2P19099 503 aa7□□□□□ -1.29
SMG1-201ENST00000330588 PDCP20941 246 aa7□□□□□ -1.29
SMG1-201ENST00000330588 NAMPTP43490 491 aa7□□□□□ -1.29
SMG1-201ENST00000330588 ALDH7A1P49419 539 aaKnown RBP7□□□□□ -1.29
SMG1-201ENST00000330588 TOB1P50616 345 aaPredicted RBP7□□□□□ -1.29
SMG1-201ENST00000330588 KCNQ1P51787 676 aa7□□□□□ -1.29
SMG1-201ENST00000330588 EFNA5P52803 228 aa7□□□□□ -1.29
SMG1-201ENST00000330588 ATP2C1P98194 919 aaPredicted RBP7□□□□□ -1.29
SMG1-201ENST00000330588 GUCY1B3Q02153 619 aa7□□□□□ -1.29
SMG1-201ENST00000330588 SMAD4Q13485 552 aaKnown RBP7□□□□□ -1.29
SMG1-201ENST00000330588 CAPSQ13938 189 aa7□□□□□ -1.29
SMG1-201ENST00000330588 KCNC3Q14003 757 aa7□□□□□ -1.29
SMG1-201ENST00000330588 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
SMG1-201ENST00000330588 NOMO2Q5JPE7 1267 aa7□□□□□ -1.29
SMG1-201ENST00000330588 LRRC55Q6ZSA7 311 aa7□□□□□ -1.29
SMG1-201ENST00000330588 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
SMG1-201ENST00000330588 FAM178BQ8IXR5 827 aa7□□□□□ -1.29
SMG1-201ENST00000330588 THNSL1Q8IYQ7 743 aa7□□□□□ -1.29
SMG1-201ENST00000330588 ALDH16A1Q8IZ83 802 aa7□□□□□ -1.29
SMG1-201ENST00000330588 GADD45GIP1Q8TAE8 222 aaPredicted RBP7□□□□□ -1.29
SMG1-201ENST00000330588 URGCPQ8TCY9 931 aa7□□□□□ -1.29
SMG1-201ENST00000330588 KIFAP3Q92845 792 aa7□□□□□ -1.29
SMG1-201ENST00000330588 TMEM143Q96AN5 459 aa7□□□□□ -1.29
SMG1-201ENST00000330588 INTS4Q96HW7 963 aaKnown RBP7□□□□□ -1.29
SMG1-201ENST00000330588 MSLNLQ96KJ4 702 aa7□□□□□ -1.29
SMG1-201ENST00000330588 AK8Q96MA6 479 aa7□□□□□ -1.29
SMG1-201ENST00000330588 PSMG3-AS1Q96PY0 264 aa7□□□□□ -1.29
SMG1-201ENST00000330588 POP1Q99575 1024 aaKnown RBP7□□□□□ -1.29
SMG1-201ENST00000330588 NT5C3AQ9H0P0 336 aa7□□□□□ -1.29
SMG1-201ENST00000330588 CSRNP2Q9H175 543 aa7□□□□□ -1.29
SMG1-201ENST00000330588 RSAD1Q9HA92 442 aa7□□□□□ -1.29
SMG1-201ENST00000330588 C17orf75Q9HAS0 396 aa7□□□□□ -1.29
SMG1-201ENST00000330588 PRMT7Q9NVM4 692 aaPredicted RBP7□□□□□ -1.29
SMG1-201ENST00000330588 KCND2Q9NZV8 630 aa7□□□□□ -1.29
SMG1-201ENST00000330588 LRWD1Q9UFC0 647 aa7□□□□□ -1.29
SMG1-201ENST00000330588 PCDHB2Q9Y5E7 798 aa7□□□□□ -1.29
SMG1-201ENST00000330588 MYO9BQ13459 2157 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SZT2Q5T011 3432 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 A0A1B0GUA9 196 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 N4BP3O15049 544 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 TSPAN1O60635 241 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 OFD1O75665 1012 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SRGAP2CP0DJJ0 459 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 HOXB8P17481 243 aaPredicted RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 FGFR4P22455 802 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 KCNA5P22460 613 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 GLRA2P23416 452 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 DNAJB1P25685 340 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 GJB2P29033 226 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 LTBRP36941 435 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 TECP42680 631 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 GATMP50440 423 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 MBTD1Q05BQ5 628 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SMC1AQ14683 1233 aaKnown RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 ZNF174Q15697 407 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 DUSP6Q16828 381 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 UBXN11Q5T124 520 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SPOUT1Q5T280 376 aaKnown RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 KRT79Q5XKE5 535 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SLC27A1Q6PCB7 646 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 APBB1IPQ7Z5R6 666 aaPredicted RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 DDX53Q86TM3 631 aaKnown RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 KSR1Q8IVT5 923 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ZBTB8OSQ8IWT0 167 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SMRP1Q8NCR6 262 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 HELQQ8TDG4 1101 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ASAP3Q8TDY4 903 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 COL26A1Q96A83 441 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 NAP1L5Q96NT1 182 aaPredicted RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 SH2D3AQ9BRG2 576 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms