RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ADAMTS10Q9H324 1103 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 ATP8B3O60423 1300 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 CHRNB2P17787 502 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 ADAM17P78536 824 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 RPGRIP1Q96KN7 1286 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 FAM81BQ96LP2 452 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 MMS19Q96T76 1030 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 PSD3Q9NYI0 1048 aa21.78■■□□□ 1.08
RIPPLY3-201ENST00000329553 CENPFP49454 3210 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 FAM170AA1A519 330 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 TSPAN1O60635 241 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 DUSP11O75319 330 aaKnown RBP21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 PALMO75781 387 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 CYP11B1P15538 503 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 FGFR4P22455 802 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 DUOXA2Q1HG44 320 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 RUFY4Q6ZNE9 571 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 EXOC4Q96A65 974 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 RPF1Q9H9Y2 349 aaKnown RBP21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 CDHR5Q9HBB8 845 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 CALCOCO1Q9P1Z2 691 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 ADAM21Q9UKJ8 722 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 GINS2Q9Y248 185 aa21.77■■□□□ 1.08
RIPPLY3-201ENST00000329553 SMIM35A0A1B0GVV1 85 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 MYADML2A6NDP7 307 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 GPR32O75388 356 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 CXCL8P10145 99 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 MCF2P10911 925 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 CYP2C9P11712 490 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 CYBAP13498 195 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 KRT5P13647 590 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 ZNF200P98182 395 aaPredicted RBP21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 PRKCZQ05513 592 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 CASP8Q14790 479 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 MFSD14CQ5VZR4 134 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 EFCAB13Q8IY85 973 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 PCDHB18PQ96TA0 734 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 NUB1Q9Y5A7 615 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 PCDHGC5Q9Y5F6 944 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 TRIP12Q14669 1992 aaPredicted RBP21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 B4GALT4O60513 344 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 STAG3L1P0CL83 205 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 TFAMQ00059 246 aaKnown RBP21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 PURAQ00577 322 aaKnown RBP21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 DEFB115Q30KQ5 88 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 CAPNS2Q96L46 248 aa21.76■■□□□ 1.07
RIPPLY3-201ENST00000329553 UMODL1Q5DID0 1318 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 TREHO43280 583 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 ERLIN2O94905 339 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 MMEP08473 750 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 NOP2P46087 812 aaKnown RBP21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 NOP14P78316 857 aaKnown RBP21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 ANK1P16157 1881 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 A0A1B0GUA9 196 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 GRID2IPA4D2P6 1211 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 MEFVO15553 781 aaPredicted RBP21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 NCK2O43639 380 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 CALCAP01258 141 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 C6orf222P0C671 652 aaPredicted RBP21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 FMO1Q01740 532 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 CKAP4Q07065 602 aaKnown RBP21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 TRIM32Q13049 653 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 CUL2Q13617 745 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 DNAJB3Q8WWF6 145 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 TLR10Q9BXR5 811 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 SNX12Q9UMY4 172 aa21.75■■□□□ 1.07
RIPPLY3-201ENST00000329553 A0A0A6YYK5 440 aaPredicted RBP21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 TARSL2A2RTX5 802 aaKnown RBP21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 ZNF185O15231 689 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 CLTAP09496 248 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 TMEM253P0C7T8 217 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 ACO1P21399 889 aaKnown RBP21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 ABCB4P21439 1286 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 GYS2P54840 703 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 MYL6P60660 151 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 CDC42EP1Q00587 391 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 DDX1Q92499 740 aaKnown RBP21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 KATNAL1Q9BW62 490 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 GCOM2Q9BZD3 368 aaPredicted RBP21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 ISCUQ9H1K1 167 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 LACTBL1A8MY62 500 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 IL18RAPO95256 599 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 ASS1P00966 412 aaKnown RBP21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 PDE6CP51160 858 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 CDR2Q01850 454 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 OSMRQ99650 979 aa21.74■■□□□ 1.07
RIPPLY3-201ENST00000329553 FTCDO95954 541 aa21.73■■□□□ 1.07
RIPPLY3-201ENST00000329553 FTLP02792 175 aaPredicted RBP21.73■■□□□ 1.07
RIPPLY3-201ENST00000329553 TMEM191BP0C7N4 346 aa21.73■■□□□ 1.07
RIPPLY3-201ENST00000329553 MCM3P25205 808 aa21.73■■□□□ 1.07
RIPPLY3-201ENST00000329553 GJA9P57773 515 aa21.73■■□□□ 1.07
RIPPLY3-201ENST00000329553 GNASQ5JWF2 1037 aa21.73■■□□□ 1.07
RIPPLY3-201ENST00000329553 THAP2Q9H0W7 228 aa21.73■■□□□ 1.07
RIPPLY3-201ENST00000329553 ANKRD62A6NC57 917 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 CLSTN1O94985 981 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 PRLRP16471 622 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 HNRNPH2P55795 449 aaKnown RBP21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 SP3Q02447 781 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 TPCN2Q8NHX9 752 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 CTNNBL1Q8WYA6 563 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms