RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GAS8O95995 478 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 MAN1A1P33908 653 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 MAGEA4P43358 317 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 KSR1Q8IVT5 923 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 RFWD2Q8NHY2 731 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 GRK7Q8WTQ7 553 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 BHMT2Q9H2M3 363 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 UBE2TQ9NPD8 197 aaPredicted RBP13.57□□□□□ -0.24
CCDC60-201ENST00000327554 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 ATXN10Q9UBB4 475 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 R3HDM2Q9Y2K5 976 aaKnown RBP13.57□□□□□ -0.24
CCDC60-201ENST00000327554 UMODL1Q5DID0 1318 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 COL24A1Q17RW2 1714 aa13.57□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L15C9J2P7 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L13C9JLJ4 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L11C9JVI0 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L18D6R9N7 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L22D6RA61 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L17D6RBQ6 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L19D6RCP7 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L20D6RJB6 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 ZCCHC18P0CG32 403 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 CA4P22748 312 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 CYP2J2P51589 502 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 RTP1P59025 263 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L24Q0WX57 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 MAPK6Q16659 721 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L6PQ6QN14 398 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 HS2ST1Q7LGA3 356 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 ERMNQ8TAM6 284 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 TUBGCP5Q96RT8 1024 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 RTFDC1Q9BY42 306 aaPredicted RBP13.56□□□□□ -0.24
CCDC60-201ENST00000327554 ASCC2Q9H1I8 757 aaPredicted RBP13.56□□□□□ -0.24
CCDC60-201ENST00000327554 VCX3BQ9H321 246 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 VCX3AQ9NNX9 186 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 NOCTQ9UK39 431 aaKnown RBP13.56□□□□□ -0.24
CCDC60-201ENST00000327554 G3BP2Q9UN86 482 aaKnown RBP13.56□□□□□ -0.24
CCDC60-201ENST00000327554 GYG2O15488 501 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 HAUS5O94927 633 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 SGPL1O95470 568 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 PENKP01210 267 aaPredicted RBP13.56□□□□□ -0.24
CCDC60-201ENST00000327554 BCRP11274 1271 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 GZMAP12544 262 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 ZNF543Q08ER8 600 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 RASIP1Q5U651 963 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 IZUMO3Q5VZ72 239 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 RINLQ6ZS11 566 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 NOP9Q86U38 636 aaKnown RBP13.56□□□□□ -0.24
CCDC60-201ENST00000327554 PRR11Q96HE9 360 aaPredicted RBP13.56□□□□□ -0.24
CCDC60-201ENST00000327554 SMC6Q96SB8 1091 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 CCDC28BQ9BUN5 200 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 BCS1LQ9Y276 419 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 TBC1D30Q9Y2I9 924 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 MYH11P35749 1972 aa13.56□□□□□ -0.24
CCDC60-201ENST00000327554 CFAP69A5D8W1 941 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 GAP43P17677 238 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
CCDC60-201ENST00000327554 GSTO1P78417 241 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 LSAMPQ13449 338 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 SLC15A2Q16348 729 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 HHATQ5VTY9 493 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 FYB2Q5VWT5 728 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 LVRNQ6Q4G3 990 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 EPS8L1Q8TE68 723 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 STMN2Q93045 179 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 NSL1Q96IY1 281 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 RBM15Q96T37 977 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC60-201ENST00000327554 MMADHCQ9H3L0 296 aaPredicted RBP13.55□□□□□ -0.24
CCDC60-201ENST00000327554 TAS2R1Q9NYW7 299 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 DCTN4Q9UJW0 460 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 GSTTP1A0A1W2PQM5 241 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 POC1B-GALNT4F8VUJ3 575 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 KRT15P19012 456 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 CYP4A11Q02928 519 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 BFSP1Q12934 665 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 MYBPC3Q14896 1274 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 LIN52Q52LA3 116 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 DAB2IPQ5VWQ8 1189 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 ZNF653Q96CK0 615 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 PLVAPQ9BX97 442 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 AGPAT3Q9NRZ7 376 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 SENP1Q9P0U3 644 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
CCDC60-201ENST00000327554 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 GTF3C4Q9UKN8 822 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 FRMD4BQ9Y2L6 1034 aa13.55□□□□□ -0.24
CCDC60-201ENST00000327554 A0A1W2PPM1 405 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 USP17L10C9JJH3 530 aa13.54□□□□□ -0.24
CCDC60-201ENST00000327554 SPATA31D3P0C874 917 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms