RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 TRAIPQ9BWF2 469 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 MOV10L1Q9BXT6 1211 aaKnown RBP21.19■□□□□ 0.98
SOX2-201ENST00000325404 DCLK3Q9C098 648 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 RPAP3Q9H6T3 665 aaPredicted RBP21.19■□□□□ 0.98
SOX2-201ENST00000325404 KCNG1Q9UIX4 513 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 FAM170AA1A519 330 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 SMIM23A6NLE4 172 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 MGRN1O60291 552 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 FDX1P10109 184 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 DLATP10515 647 aaKnown RBP21.19■□□□□ 0.98
SOX2-201ENST00000325404 PPARDQ03181 441 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 UBAP2Q5T6F2 1119 aaKnown RBP21.19■□□□□ 0.98
SOX2-201ENST00000325404 ANO5Q75V66 913 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 PDCD2LQ9BRP1 358 aa21.19■□□□□ 0.98
SOX2-201ENST00000325404 OAS1P00973 400 aaKnown RBP21.18■□□□□ 0.98
SOX2-201ENST00000325404 RPS6P62753 249 aaKnown RBP21.18■□□□□ 0.98
SOX2-201ENST00000325404 NSMFQ6X4W1 530 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 CEP128Q6ZU80 1094 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 C1orf54Q8WWF1 131 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 DDX27Q96GQ7 796 aaKnown RBP21.18■□□□□ 0.98
SOX2-201ENST00000325404 POP1Q99575 1024 aaKnown RBP21.18■□□□□ 0.98
SOX2-201ENST00000325404 FOXP3Q9BZS1 431 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 ASIC3Q9UHC3 531 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 CTDP1Q9Y5B0 961 aaPredicted RBP21.18■□□□□ 0.98
SOX2-201ENST00000325404 PCDHA10Q9Y5I2 948 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 TMEM150BA6NC51 233 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 SUPT20HL1Q3ZLR7 823 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 CPXCR1Q8N123 301 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 MCPH1Q8NEM0 835 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 POMGNT1Q8WZA1 660 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 NCAPGQ9BPX3 1015 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 PLCD4Q9BRC7 762 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 PXMP2Q9NR77 195 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 HAUS2Q9NVX0 235 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 LGALS13Q9UHV8 139 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 MROH7Q68CQ1 1323 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 MYPNQ86TC9 1320 aa21.18■□□□□ 0.98
SOX2-201ENST00000325404 CFAP73A6NFT4 308 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 PSTPIP1O43586 416 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 ATP9AO75110 1047 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 DDNO94850 711 aaPredicted RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 CYP1A1P04798 512 aaPredicted RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 VIMP08670 466 aaKnown RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 EIF2AK2P19525 551 aaKnown RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 SLCO1A2P46721 670 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 WLSQ5T9L3 541 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 PLA2G4FQ68DD2 849 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 TRIM72Q6ZMU5 477 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 TRPM8Q7Z2W7 1104 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 CCDC25Q86WR0 208 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 ARHGEF2Q92974 986 aaKnown RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 KLRG1Q96E93 195 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 VCPIP1Q96JH7 1222 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 PDLIM7Q9NR12 457 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 C1orf112Q9NSG2 853 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 FZD1Q9UP38 647 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 NEU2Q9Y3R4 380 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 UTRNP46939 3433 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 SNX3O60493 162 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 PROSCO94903 275 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 RDXP35241 583 aaKnown RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 GPRASP2Q96D09 838 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 RAVER2Q9HCJ3 691 aaKnown RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 TOPORSQ9NS56 1045 aaPredicted RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 RNF181Q9P0P0 153 aa21.17■□□□□ 0.98
SOX2-201ENST00000325404 ZNFX1Q9P2E3 1918 aaKnown RBP21.17■□□□□ 0.98
SOX2-201ENST00000325404 KRT5P13647 590 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 KLF1Q13351 362 aaPredicted RBP21.16■□□□□ 0.98
SOX2-201ENST00000325404 CCNG2Q16589 344 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 PREPLQ4J6C6 727 aaPredicted RBP21.16■□□□□ 0.98
SOX2-201ENST00000325404 UHMK1Q8TAS1 419 aaKnown RBP21.16■□□□□ 0.98
SOX2-201ENST00000325404 RMDN3Q96TC7 470 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 ELAC2Q9BQ52 826 aaKnown RBP21.16■□□□□ 0.98
SOX2-201ENST00000325404 SH2D3AQ9BRG2 576 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 DDX23Q9BUQ8 820 aaKnown RBP21.16■□□□□ 0.98
SOX2-201ENST00000325404 CHST7Q9NS84 486 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.16■□□□□ 0.98
SOX2-201ENST00000325404 ACTL7BQ9Y614 415 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 SBF1O95248 1867 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 ZBED4O75132 1171 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 ATF2P15336 505 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 MKRN3Q13064 507 aaKnown RBP21.16■□□□□ 0.98
SOX2-201ENST00000325404 BSNDQ8WZ55 320 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 ATP6V0A1Q93050 837 aa21.16■□□□□ 0.98
SOX2-201ENST00000325404 DGAT1O75907 488 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 STBD1O95210 358 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 ITGA8P53708 1063 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 GBP7Q8N8V2 638 aaPredicted RBP21.15■□□□□ 0.98
SOX2-201ENST00000325404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.15■□□□□ 0.98
SOX2-201ENST00000325404 ANAPC5Q9UJX4 755 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 POTEJP0CG39 1038 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 MYCLP12524 364 aaPredicted RBP21.15■□□□□ 0.98
SOX2-201ENST00000325404 SLC8A1P32418 973 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 PSMD6Q15008 389 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 LONRF1Q17RB8 773 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 VSTM1Q6UX27 236 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 MON1BQ7L1V2 547 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 KATNAL2Q8IYT4 538 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 CCDC89Q8N998 374 aa21.15■□□□□ 0.98
SOX2-201ENST00000325404 ADARB2Q9NS39 739 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms