RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 IZUMO3Q5VZ72 239 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 RWDD4Q6NW29 188 aaKnown RBP12.55□□□□□ -0.4
DDR1-223ENST00000324771 RSPH3Q86UC2 560 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 SMC6Q96SB8 1091 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 GCOM2Q9BZD3 368 aaPredicted RBP12.55□□□□□ -0.4
DDR1-223ENST00000324771 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 ERAP1Q9NZ08 941 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 SPAG7O75391 227 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 CALB1P05937 261 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 CXCL8P10145 99 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 CHRNA3P32297 505 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 ARSEP51690 589 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 FYB2Q5VWT5 728 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 PHLDB3Q6NSJ2 640 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 P3H4Q92791 437 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 FAF2Q96CS3 445 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDR1-223ENST00000324771 KLHL14Q9P2G3 628 aa12.55□□□□□ -0.4
DDR1-223ENST00000324771 ZNF263O14978 683 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 PHBP35232 272 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 MRPS9P82933 396 aaKnown RBP12.54□□□□□ -0.4
DDR1-223ENST00000324771 LMNB2Q03252 620 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 PARD3BQ8TEW8 1205 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 BAP1Q92560 729 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 G3BP2Q9UN86 482 aaKnown RBP12.54□□□□□ -0.4
DDR1-223ENST00000324771 SLIT2O94813 1529 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 NPTXRO95502 500 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 ADRB2P07550 413 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 MSH2P43246 934 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
DDR1-223ENST00000324771 OSBPL8Q9BZF1 889 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 VAV3Q9UKW4 847 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 RASA4BC9J798 803 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 RASA4O43374 803 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
DDR1-223ENST00000324771 GH1P01241 217 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 INSRRP14616 1297 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 PBX1P40424 430 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 PDIA2Q13087 525 aaKnown RBP12.54□□□□□ -0.4
DDR1-223ENST00000324771 MEA1Q16626 185 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 LGSNQ5TDP6 509 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 IER5Q5VY09 327 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 ARHGEF18Q6ZSZ5 1173 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 CROCCP2Q86T23 111 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 SIAH1Q8IUQ4 282 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 ZSWIM2Q8NEG5 633 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 KLF6Q99612 283 aaPredicted RBP12.54□□□□□ -0.4
DDR1-223ENST00000324771 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 SETD4Q9NVD3 440 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 PARVAQ9NVD7 372 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 PFASO15067 1338 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 FRMPD4Q14CM0 1322 aa12.54□□□□□ -0.4
DDR1-223ENST00000324771 CCNE2O96020 404 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 FAM153BP0C7A2 387 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 CYP24A1Q07973 514 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 CUL2Q13617 745 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 TMEM132DQ14C87 1099 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 FAM153CQ494X1 144 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 TREML2Q5T2D2 321 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 ENOSF1Q7L5Y1 443 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 KDELC2Q7Z4H8 507 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 MDM1Q8TC05 714 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 FAM153AQ9UHL3 310 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 SCN11AQ9UI33 1791 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 PARP4Q9UKK3 1724 aaKnown RBP12.53□□□□□ -0.4
DDR1-223ENST00000324771 C5P01031 1676 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 IGKV6D-41A0A0C4DH26 115 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 CPP00450 1065 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 CYP3A4P08684 503 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 RFX1P22670 979 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 BCAR1P56945 870 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 BBOF1Q8ND07 529 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 FBXO25Q8TCJ0 367 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 KRT35Q92764 455 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 CYP3A7-CYP3A51PA0A087WV96 503 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 TARSL2A2RTX5 802 aaKnown RBP12.53□□□□□ -0.4
DDR1-223ENST00000324771 A6NNZ2 444 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 CYP3A7P24462 503 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 TUBB8Q3ZCM7 444 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 ANO5Q75V66 913 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 CEP120Q8N960 986 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 RBM41Q96IZ5 413 aaKnown RBP12.53□□□□□ -0.4
DDR1-223ENST00000324771 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
DDR1-223ENST00000324771 HBP1O60381 514 aa12.52□□□□□ -0.4
DDR1-223ENST00000324771 TLR2O60603 784 aa12.52□□□□□ -0.4
DDR1-223ENST00000324771 BRAFP15056 766 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms