RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TPI1P60174 286 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 ERVK-24P63145 666 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 CATSPER3Q86XQ3 398 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 GJD4Q96KN9 370 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 USP15Q9Y4E8 981 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 GOLGA8RI6L899 631 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 PSMD3O43242 534 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 ATMINO43313 823 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 MOCS2O96007 188 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 ENO1P06733 434 aaKnown RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 BTBD8Q5XKL5 378 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 PLA2G4FQ68DD2 849 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 GJB7Q6PEY0 223 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 OR6J1Q8NGC5 347 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 SLC26A7Q8TE54 656 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 MKNK1Q9BUB5 465 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 IL18RAPO95256 599 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 RPA1P27694 616 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 CDK17Q00537 523 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 GRB10Q13322 594 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 HIC1Q14526 733 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 TMEM132DQ14C87 1099 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 MTHFD1LQ6UB35 978 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 RFX8Q6ZV50 586 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 ANO5Q75V66 913 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 PID1Q7Z2X4 250 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 APPL2Q8NEU8 664 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 ATXN7L3BQ96GX2 97 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 EIF2AQ9BY44 585 aaKnown RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 UNC45AQ9H3U1 944 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 NPHS2Q9NP85 383 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 SLC37A4O43826 429 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 E2F6O75461 281 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 MDH1BQ5I0G3 518 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 SARS2Q9NP81 518 aaKnown RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 AP3B1O00203 1094 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 ATP9BO43861 1147 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 CHRNA5P30532 468 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 PGM1P36871 562 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 RBP5P82980 135 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 BAATQ14032 418 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 RNF219Q5W0B1 726 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 RNF135Q8IUD6 432 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 SH3TC2Q8TF17 1288 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 YIPF3Q9GZM5 350 aa11.49□□□□□ -0.57
SNRNP200-201ENST00000323853 CAPRIN1Q14444 709 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 ABT1Q9ULW3 272 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 TXNP10599 105 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 ITGA8P53708 1063 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 PRKCEQ02156 737 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 WDR72Q3MJ13 1102 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 RBM43Q6ZSC3 357 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 FASTKD5Q7L8L6 764 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 TRAPPC11Q7Z392 1133 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 DDIASQ8IXT1 998 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 COL3A1P02461 1466 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 PRAMEP78395 509 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 KRT33BQ14525 404 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 COG2Q14746 738 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 TTC39BQ5VTQ0 682 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 LRRC8EQ6NSJ5 796 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 HNRNPLLQ8WVV9 542 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 SLC13A4Q9UKG4 626 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 TFR2Q9UP52 801 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 PPLO60437 1756 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 HLA-DRAP01903 254 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 SERPINB9P50453 376 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 ZNF200P98182 395 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 LMCD1Q9NZU5 365 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 FAM47DPA6NHR8 397 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 POLRMTO00411 1230 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 CARSP49589 748 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 TPCN2Q8NHX9 752 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 RIN2Q8WYP3 895 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 RIT2Q99578 217 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 EPAS1Q99814 870 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 VCPKMTQ9H867 229 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 ZFATQ9P243 1243 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 KIF17Q9P2E2 1029 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 GPR75-ASB3A0A0A6YYF3 556 aa11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 AARSP49588 968 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 NOA1Q8NC60 698 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-201ENST00000323853 ESRRBO95718 433 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 RALAP11233 206 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 RGS7P49802 495 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 TAS2R42Q7RTR8 314 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 AGGF1Q8N302 714 aaeCLIP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 CASKIN2Q8WXE0 1202 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SH2D3AQ9BRG2 576 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SCHIP1Q9P0W5 487 aaPredicted RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 PRKAG2Q9UGJ0 569 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 CNTNAP4Q9C0A0 1308 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 TMEM247A6NEH6 219 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 C19orf81C9J6K1 198 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 LSP1P33241 339 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms